Gene Shewmr7_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3949 
Symbol 
ID4255954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4690437 
End bp4691639 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content52% 
IMG OID638124638 
Producthypothetical protein 
Protein accessionYP_739983 
Protein GI114049433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTCA GTTCGTCTTG TATCAAGTTA TGTCTGTTGA CCAGCTTAGT CGGTAGTAGT 
TTCCTGTGTC TTGCGGCGGA AGCCGAACTT TCCCAAGCGC TTTCGAGCAG CCAAGCGAGG
TTGGCTCATC TCACTTCGTC GAATACCCAA GCGGCAAATT TATCCAGCTC GACCTGGCTC
TCTGGCCTGC CGAGCATTAG CTTAAGTCAC CTCGGGAGCT TGGATAATAG TAACAGCTAC
GAGCAGGAAC TCTCAGTCAA TTTGCCATTT AAATCGCCCG CGCTACACAG CAGCGATAAG
CAAATAAAAC AGCTCGCCGA GCAAATTCAT CAACAACAAA CGGCCCTGCA AGGCTTGTAT
CTCTCGGGAT TATTAAGGCA AAGCCTGTGG GAATATCGCC AGAGCGAAGT CAAACTGTCA
CAGCTTGAGC GCAAACAGCA GTTGCTCGAT AAACTCCATC GCCAGCAAAA ACAACTGACC
GATGCGGGGG AATTGCCACT GGCCAACACT CTGCTACTGG AGCGGGAAAG TGTCGATATC
GCCTTAAGCC GCGCCGACAT TCTGCAGCAA CAAGCTCAAT CTTTAGCCCT GTATCAACAG
CTGACGGGCC AAGACCGAAT GCCCAGCGCG ATAGAAGAAA CTGACCGCCC GCTTGGCAAG
GGCGCCGAGA CCTTAGCCCA ACATCCCCTA TGGCAATTGC TAAAACTGCA ACAACAGCAA
CACTTGCTGC TGATCCAAAC TCAGCAAGCG GGTGAGCGCG ATCCTTGGAC CGTCTCACTC
ACTGCAAAAA ATACCGCGGA TACGGGCGTG GATGATCAGC AGTTAGGCAT AGCCGTGTCA
GTCCCCTTAA CCTTGGGCTC GGCGCTGTCC CAGAGTGATT TATCCCAATG GCAACAAGCG
AATACCGAGC AAAGTCTCAA TCTTGACCGC AGCGCACTCG AGCTTAAAAA CCAGTGGGAT
CAATTAGTCC GCCAGCAAAC TAACCTCGTC GAGCAACAGC GCTTACTCAC CCAAGCGCTC
GCCCTCAGTC GCACCATTAC CGAGGAACTC GCCAAAGTAA AAGATCAAGA TCAGGTGAGT
TATGAAGTCT GGCTGCGCCG CTATATGGAG GCGCTCGACA CCGAATCCCG CTTGGCGCTC
AACCGCGTCA GCTTGCAACA ACTGCATTCT CAACAACTCC AAGCCTTAGG AATTTCATTA
TGA
 
Protein sequence
MSVSSSCIKL CLLTSLVGSS FLCLAAEAEL SQALSSSQAR LAHLTSSNTQ AANLSSSTWL 
SGLPSISLSH LGSLDNSNSY EQELSVNLPF KSPALHSSDK QIKQLAEQIH QQQTALQGLY
LSGLLRQSLW EYRQSEVKLS QLERKQQLLD KLHRQQKQLT DAGELPLANT LLLERESVDI
ALSRADILQQ QAQSLALYQQ LTGQDRMPSA IEETDRPLGK GAETLAQHPL WQLLKLQQQQ
HLLLIQTQQA GERDPWTVSL TAKNTADTGV DDQQLGIAVS VPLTLGSALS QSDLSQWQQA
NTEQSLNLDR SALELKNQWD QLVRQQTNLV EQQRLLTQAL ALSRTITEEL AKVKDQDQVS
YEVWLRRYME ALDTESRLAL NRVSLQQLHS QQLQALGISL