Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3949 |
Symbol | |
ID | 4255954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4690437 |
End bp | 4691639 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124638 |
Product | hypothetical protein |
Protein accession | YP_739983 |
Protein GI | 114049433 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGTCA GTTCGTCTTG TATCAAGTTA TGTCTGTTGA CCAGCTTAGT CGGTAGTAGT TTCCTGTGTC TTGCGGCGGA AGCCGAACTT TCCCAAGCGC TTTCGAGCAG CCAAGCGAGG TTGGCTCATC TCACTTCGTC GAATACCCAA GCGGCAAATT TATCCAGCTC GACCTGGCTC TCTGGCCTGC CGAGCATTAG CTTAAGTCAC CTCGGGAGCT TGGATAATAG TAACAGCTAC GAGCAGGAAC TCTCAGTCAA TTTGCCATTT AAATCGCCCG CGCTACACAG CAGCGATAAG CAAATAAAAC AGCTCGCCGA GCAAATTCAT CAACAACAAA CGGCCCTGCA AGGCTTGTAT CTCTCGGGAT TATTAAGGCA AAGCCTGTGG GAATATCGCC AGAGCGAAGT CAAACTGTCA CAGCTTGAGC GCAAACAGCA GTTGCTCGAT AAACTCCATC GCCAGCAAAA ACAACTGACC GATGCGGGGG AATTGCCACT GGCCAACACT CTGCTACTGG AGCGGGAAAG TGTCGATATC GCCTTAAGCC GCGCCGACAT TCTGCAGCAA CAAGCTCAAT CTTTAGCCCT GTATCAACAG CTGACGGGCC AAGACCGAAT GCCCAGCGCG ATAGAAGAAA CTGACCGCCC GCTTGGCAAG GGCGCCGAGA CCTTAGCCCA ACATCCCCTA TGGCAATTGC TAAAACTGCA ACAACAGCAA CACTTGCTGC TGATCCAAAC TCAGCAAGCG GGTGAGCGCG ATCCTTGGAC CGTCTCACTC ACTGCAAAAA ATACCGCGGA TACGGGCGTG GATGATCAGC AGTTAGGCAT AGCCGTGTCA GTCCCCTTAA CCTTGGGCTC GGCGCTGTCC CAGAGTGATT TATCCCAATG GCAACAAGCG AATACCGAGC AAAGTCTCAA TCTTGACCGC AGCGCACTCG AGCTTAAAAA CCAGTGGGAT CAATTAGTCC GCCAGCAAAC TAACCTCGTC GAGCAACAGC GCTTACTCAC CCAAGCGCTC GCCCTCAGTC GCACCATTAC CGAGGAACTC GCCAAAGTAA AAGATCAAGA TCAGGTGAGT TATGAAGTCT GGCTGCGCCG CTATATGGAG GCGCTCGACA CCGAATCCCG CTTGGCGCTC AACCGCGTCA GCTTGCAACA ACTGCATTCT CAACAACTCC AAGCCTTAGG AATTTCATTA TGA
|
Protein sequence | MSVSSSCIKL CLLTSLVGSS FLCLAAEAEL SQALSSSQAR LAHLTSSNTQ AANLSSSTWL SGLPSISLSH LGSLDNSNSY EQELSVNLPF KSPALHSSDK QIKQLAEQIH QQQTALQGLY LSGLLRQSLW EYRQSEVKLS QLERKQQLLD KLHRQQKQLT DAGELPLANT LLLERESVDI ALSRADILQQ QAQSLALYQQ LTGQDRMPSA IEETDRPLGK GAETLAQHPL WQLLKLQQQQ HLLLIQTQQA GERDPWTVSL TAKNTADTGV DDQQLGIAVS VPLTLGSALS QSDLSQWQQA NTEQSLNLDR SALELKNQWD QLVRQQTNLV EQQRLLTQAL ALSRTITEEL AKVKDQDQVS YEVWLRRYME ALDTESRLAL NRVSLQQLHS QQLQALGISL
|
| |