| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3940 |
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| Symbol | |
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| ID | 4257833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4681156 |
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| End bp | 4682652 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124629 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_739974 |
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| Protein GI | 114049424 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC TCTCTTACGT TTCATTGGCA ATTTACTTTA TTGCCATGCT CGCTATTGGT
TTGTTCGCCT ATCGCAAGTC GACCGATGAT GTCTCTGGCT ACATTTTGGG GGGCCGCCAA
GTGAGCCCAC AAGTCACGGC ACTCTCGGCT GGCGCCTCGG ATATGAGTGG CTGGATGCTG
ATGGGCCTGC CCGGCGCTAT GTTTCTGGTG GGGTTTGAAA CCCTGTATAT CGCCCTCGGA
TTATTAATTG GTGCTCTAAT CAATTATCTG GTAGTTGCCC CTAAATTGCG GGTCTACACC
GAGGTCGCCG ATAACGCGCT GACTATCCCT GAGTTCTTCG CTAAACGCTT TGGTCAGGCC
GATAACAGCA TTCGTATTAT TGCCGCGGCC ATCATAGTGA TCTTTTTCAC CCTCTATACC
TCAGCGGGAT TAGTCGCAGG CGGCAAGTTG TTCGAATCTG CCTTTGGGCT GAACTACGAT
ATTGGCCTAG TGGTCACCTT AGCCGTCGTG GTGTCGTACA CTCTGCTGGG GGGATTTTTA
GCCGTTAGCC TTACCGACTT TGTGCAAGGC TGCATTATGT TTGTCGCCTT GGTTTTGGTG
CCTTTCGTGG CATATCAAGA ATTTACCAGC GCAGATCGTA TGATGAACTT TGCTTATCAG
TCGATCCCGC ATTTTACCGA CGCGATGCAA AATGTGACGC TGCTAGGCTT AATCTCCAGC
CTCTCGTGGG GACTTGGGTA TTTCGGCCAG CCGCATATTA TTGTACGTTT TATGGCGATC
CGCTCGGTCG CCGACATTAA AACCGCACGC CGCATCGGCA TCAGCTGGAT GACAGTGACC
ATTATCGGTG CCTTAGCGAC AGGCTTGGTC GGTATCGCCT ACGCCAATAA ATTTGGCATG
AAACTGTCAG ACCCTGAAAC CATCTTTATC GTGTTTTCAG AGTTGCTGTT CCATCCCTTA
ATCAGCGGCT TCCTACTGGC AGCGATCCTC GCGGCCATTA TGAGCACGAT TTCATCGCAG
TTATTAGTCT CGTCGAGTTC GCTGACCGAA GATATTTATC GCACGCTGTC GAAGAAACAA
GCGAGCGAGC AAGAGATGGT AAAAATGGGT CGTTACGGGG TCGCAGGTGT CGCCATTGTC
GCAACGCTGC TGGCACTCGA CCGCTCGAAC AGTATCCTCT CCCTCGTGAG TAATGCGTGG
GCAGGCTTTG GTGCTGCATT TGGTCCGCTG GTGCTGTTTA GTTTGTATAA GGCTAACCTC
ACCCATAAAG CGGCGATTGC GGGGATTATT TCGGGCGCGC TCACGGTACT CTTTTGGATT
TATGCCCCCG TGCTTGCCGA TGGTAAGGCA TTGAGTAGCT TAGTGTATGA GATGATCCCA
GGCTTTGTTG TCAGCAGCAC AGTGATTTAT CTGGTGAGCA AATTCGATAC CGATCCTTGT
CCTAAAACCA CTAAGCAATT CCATCAGGCT GGTCGTGTAC TGGCCGAGGA AAGCTAA
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| Protein sequence | MNSLSYVSLA IYFIAMLAIG LFAYRKSTDD VSGYILGGRQ VSPQVTALSA GASDMSGWML
MGLPGAMFLV GFETLYIALG LLIGALINYL VVAPKLRVYT EVADNALTIP EFFAKRFGQA
DNSIRIIAAA IIVIFFTLYT SAGLVAGGKL FESAFGLNYD IGLVVTLAVV VSYTLLGGFL
AVSLTDFVQG CIMFVALVLV PFVAYQEFTS ADRMMNFAYQ SIPHFTDAMQ NVTLLGLISS
LSWGLGYFGQ PHIIVRFMAI RSVADIKTAR RIGISWMTVT IIGALATGLV GIAYANKFGM
KLSDPETIFI VFSELLFHPL ISGFLLAAIL AAIMSTISSQ LLVSSSSLTE DIYRTLSKKQ
ASEQEMVKMG RYGVAGVAIV ATLLALDRSN SILSLVSNAW AGFGAAFGPL VLFSLYKANL
THKAAIAGII SGALTVLFWI YAPVLADGKA LSSLVYEMIP GFVVSSTVIY LVSKFDTDPC
PKTTKQFHQA GRVLAEES
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