Gene Shewmr7_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3939 
Symbol 
ID4257832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4679880 
End bp4680701 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content49% 
IMG OID638124628 
Producthypothetical protein 
Protein accessionYP_739973 
Protein GI114049423 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAT GTTATTCATT TATCGCAGGT ATCGCCCTGC TGCCCCTATA CACAGCGCAC 
GCGGCCGACA GTAACACAAC ACCTGTCGTA AAAACTGAAA AGCAGCCGCA GGATATGTCC
GATCCGCTTG CGATTTATAC TCAAGCGGGC TTTGGCGTAA CAGATAAAGG CCTCAACCTT
AAAATAGGCC AAGCCTATGA TACGGGTGAA GAAAACAAAG CCGGGATGAA TGTCATCGAA
GTGAAGGGGA TCTTTGGCGA TACCTTAGGC TGGCGAGGTG AAGGCGCCGC CTCTGACTCT
GTCGACTCAT TCCGCTTTCG TAACTTTACC GCCAATGTCA CCAATGGCCG AGCCGCGCAA
ATTGATATCA GCTATAACCT TAATCCTAAC TTAGTCGCTC AAGAGAGTGC CGATCTGTCC
TATAGCTTTA TCCAAGCCTT ACCTCCAATG GGGCGATTCA GCCTCTACCC ATTGGTTGGC
GCAGGTGTGT CTATTGGTAA CGACGCCCTC GAAGATGATG GTTCCATCGA CAGCGGTTAC
TCCATCATGG GCGTTTACGG CCTAGTGGGA ATGTATAGTA AGCTCAAGAT CACCGACAAA
ATCTGGTTGA ATTACAATCC CTTCTGGCTG ACGACTATTT CGGGCTCTGA CAATTACACC
GACAACTATT ATGGCTTGGG CAAGAGCCAT ATCTTAACCC ACGAGCTCGC GCTCAGTTAC
CAAATCAACC CACGAATGAA CCTGCGCTAC TTTGCCAACT TTAATGAAAA CGTTAGCTTT
ATGGACGGTG ATCATAGGAT AGAGTTTAAC TACCAGCTCT AG
 
Protein sequence
MRACYSFIAG IALLPLYTAH AADSNTTPVV KTEKQPQDMS DPLAIYTQAG FGVTDKGLNL 
KIGQAYDTGE ENKAGMNVIE VKGIFGDTLG WRGEGAASDS VDSFRFRNFT ANVTNGRAAQ
IDISYNLNPN LVAQESADLS YSFIQALPPM GRFSLYPLVG AGVSIGNDAL EDDGSIDSGY
SIMGVYGLVG MYSKLKITDK IWLNYNPFWL TTISGSDNYT DNYYGLGKSH ILTHELALSY
QINPRMNLRY FANFNENVSF MDGDHRIEFN YQL