| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3932 |
|---|
| Symbol | |
|---|
| ID | 4257825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4672055 |
|---|
| End bp | 4672744 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124621 |
|---|
| Product | 3-methyladenine DNA glycosylase |
|---|
| Protein accession | YP_739966 |
|---|
| Protein GI | 114049416 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2818] 3-methyladenine DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGT TAGAAAGTTT CTCATCCATC TATGCCAGAG CGAGTGAACG TAAGGGCGGT
AAAGCGGGAC TCGAAGCATT ATTACCCGGC TGCCTTAGCA GTGCCGAGCT TCGTCAGTAT
GATGATGCAA GGCTACTCTC AGCCATGAGC CGCCAGGTGT TTCAGAGTGG TTTTGTCTGG
CGCGTTGTCG ATAACAAATG GCCTGCCTAT GAGCAGTCCT TCTTTCATTT TGCACCCGAA
AAAGTATTGA TGTTATCGCC AGAGCAGATC CAAGCTCGCG CCGCGGATGC GACTCTGATC
CGCCATTTAA AGAAAACCCA AGCGATTTAT GATAATGCCT TGATGATCCA CGATATTGCC
CGCGAGCATG GCAGCTTGGC AAAGCTGATT GCCGACTGGC CAACCGAAGA CATAGTCGGG
CTCTGGGCAC TCTTAAAGAA ACGAGGCGCT CGCCTCGGTG GCAATACGGG GCCGTATTTC
CTGCGCGGTA TTGGTAAGGA CACCTTTTTG TTAACCGATG ATGTGCAGGG CTACTTTAAA
GCCCACAAGT TGGTGGATGC GGGTTTTAGC TCGCAAACGG CGCTAAAGCA GGTGCAAGCG
GTATTCAACC AATGGCAGCA AGAATCGGGT CGGTGTCTTG CGGATATCAG TCGCGTCTTA
GCCTGCAGCG TTGGGGATAA CCGTATTTAG
|
|---|
| Protein sequence | MSQLESFSSI YARASERKGG KAGLEALLPG CLSSAELRQY DDARLLSAMS RQVFQSGFVW
RVVDNKWPAY EQSFFHFAPE KVLMLSPEQI QARAADATLI RHLKKTQAIY DNALMIHDIA
REHGSLAKLI ADWPTEDIVG LWALLKKRGA RLGGNTGPYF LRGIGKDTFL LTDDVQGYFK
AHKLVDAGFS SQTALKQVQA VFNQWQQESG RCLADISRVL ACSVGDNRI
|
|---|
| |