| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3931 |
|---|
| Symbol | |
|---|
| ID | 4257824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4671206 |
|---|
| End bp | 4671952 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638124620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739965 |
|---|
| Protein GI | 114049415 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTA TGAAGACTCG TACTAAATTT CTGCTGACAG GAGCATTGCT TTCTTTGGCG
GCAAGCTCTC ACGGCGCCGA AGATAATCAA CTCTTTGGTG GCACTATTAA TGGCAATGTT
AACTTTGCTT CAGATTATGT TTTTCGCGGT GAATCTGAAA CTTTAGACGG TGATATTCCC
GTCGTACAAG GCACACTAAG CTGGAACCAC AACCAAGGCT GGTATGCGGG CGTATTCAGC
TCCAACATCA AATTTGCCGA CCCTAACCTA GAGATAGTCA CCGCGCCATT TATTGGTAAA
GCGGGTGAAT TTGGCGACTC GGGTTTTACC TATGATGTGA TGCTGTTTTC ATACCTTTAC
CCCGGTGCGT CCTACTCCAA CTATACCGAG TTATGGTTAA AAGTGGGCAA ACAATTTGGC
CGCGCAAATC TGCAACTCGA AGTCACCCCA ACGGTGGATG ATTGGTTTGG TGTCGATGGC
TGGCACGGCG TTAACTATGC CCTGCACCCA AGCTATAGCT TTGATAATGG TGTAAAAATC
TCAGCTTCCG TTGGTTATCA AGACTTAAGT GGTAATGGCG CCGAAGGTTG GGGTCACTGG
AACATTGGCC TGAGCAAAGC CTATTACGGC CTTAACTTCG ACCTACGTTA CCACGGCAGC
ACTGTGGAAA GTGACCATAA AGTCTATGGC ACACAAACTG AAATCTTCGA TGACAGAGTC
GTCATTGGGA TCAGTAAAAG TTTCTAA
|
|---|
| Protein sequence | MMIMKTRTKF LLTGALLSLA ASSHGAEDNQ LFGGTINGNV NFASDYVFRG ESETLDGDIP
VVQGTLSWNH NQGWYAGVFS SNIKFADPNL EIVTAPFIGK AGEFGDSGFT YDVMLFSYLY
PGASYSNYTE LWLKVGKQFG RANLQLEVTP TVDDWFGVDG WHGVNYALHP SYSFDNGVKI
SASVGYQDLS GNGAEGWGHW NIGLSKAYYG LNFDLRYHGS TVESDHKVYG TQTEIFDDRV
VIGISKSF
|
|---|
| |