| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3915 |
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| Symbol | |
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| ID | 4257808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4653706 |
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| End bp | 4655685 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124604 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_739949 |
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| Protein GI | 114049399 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTTC TCGGTAAATT AAGCTTAGAT GCGATCCCGT ATCATGAGCC TATCATCATG
GTGACCCTTG CGGTTGTTGC CGTGATAGGC CTGTACGTCG CAGCCTTGAT CACTAAACAC
AAAAAATGGG GTGTGCTTTG GCACGACTGG TTAACTTCGG TTGACCATAA ACGCCTCGGT
ATCATGTACA TAGTGCTTGC CTTCATCATG TTGATCCGCG GTTTCTCCGA CGCCATCATG
ATGCGTACCC AACAGGCACT GGCCACCAAT GGCGCCGCAG GTTATCTGCC GCCAGAACAT
TACGACCAAA TCTTCACAGC CCACGGCGTG ATCATGATTA TCTTTATGGC GATGCCATTT
ATGATCGGTC TAATGAACTT AGTGCTGCCA CTGCAAATCG GTGCCCGCGA CGTTGCCTTC
CCCTTCTTGA ACAACCTCAG CTTCTGGTTA ACCGCGTCTG GTGCCGTGCT GATCAATATT
TCATTAGGTT TAGGCGAGTT TGCTAAGACG GGTTGGGTGG CTTACCCGCC CTTGTCTGAG
CTGGCTTACA GTCCGGGCGT CGGGGTCGAT TACTATATTT GGGCACTGCA GATTTCGGGG
ATAGGGACAA CCTTAACTGG GGTCAACTTT ATCGCGACTG TGCTTAAGAT GCGCGCCCCA
GGCATGAAGC TGATGCAAAT GCCCATCTTC ACTTGGACTT GTACTTGGGC CAACATCTTG
ATCGTGGCGT CGTTCCCGAT CCTGACCGCG GTTTTAGCGC TGTTAACACT CGATCGCTAC
ATGGGTTTCC ACTTCTTCAC CAATGATGGT GGTGGTAACG CCATGATGTA TATCAACCTG
TTCTGGGCTT GGGGTCACCC TGAAGTGTAC ATCCTGATTT TACCTGCGTT CGGTATCTTC
TCAGATGTGA TTTCAACCTT TACCTCTAAG CGTCTGTTCG GCTATTCCTC AATGGTATGG
GCCAGTGGCG CGATTTCGAT CCTCGGTTTT ATCGTGTGGT TACACCACTT CTTCACCATG
GGCTCTAGCG CCAACGTCAA CGCCTTCTTC GGCGTGATGA CTATGGTGAT TGCGGTCCCG
ACTGGGGTAA AACTGTTTAA CTGGTTGTTC ACCATTTACC GCGGCCGCCT GCGCTTAACT
GTGCCAGTGC TGTGGACCTT AGGCTTTATG GTGACTTTCA CCATTGGTGG TATGACGGGC
GTGTTATTGG CCGTACCAGG CGCCGACTAC GTGCTACACA ACAGCTTGTT CCTGATCGCT
CACTTCCATA ACACCATTAT CGGTGGTGCC GTGTTCGGTT ACTTAGCCGG TTTTGCTTAC
TGGTTCCCGA AAGCGACGGG TTTCCACTTA AATGAGCGTT TAGGTAAAGC GTCATTCTGG
TGCTGGCAGA TTGGTTTCTA TGTGGCCTTT ATGCCGCTGT ATGTACTCGG TTTTATGGGT
ATGACTCGCC GTATCAACCA CATTGATAAC CCAGCATGGA ACATGTGGAT CTATATCGCT
GCCGTGGGTG CTTGCATCAT CATGGTCGGT ATCATTCTGC AATTCGTGCA ACTGTACGTG
AGTATCCGTG ACCGCGACCA AAACCGTGAC ACCACGGGCG ACCCATGGAA TGGCCACACG
CTGGAATGGT CAACCGCATC ACCACCACAG TTCTACAACT TTGCTAAGTT GCCACAAGTG
TCTGATATCG ATGCCTTTAC CGATGCCAAA GAAAAAGGCA CTGCCTATCA ACGCCTCAAA
CACTATCAGC CAATCCATAT GCCGAAAAAT ACCCCAAGCG GTATCTTAAT GGCGCTTGGC
ATTACTGCCG CAGGTTTTGC TGCGATTTGG CACATTCTGT GGCTCGCGAT TGTGGGCATG
GTGGGCGCGT TTATCGTGTT CTTATTCCGT GCTTATAACA ACGATGTCGA CTATTACGTT
CAACCCGATG AAGTGGCACG CATTGAAAAT GCTCACTTAA ACAATGTAGT AAGGGGCTGA
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| Protein sequence | MSFLGKLSLD AIPYHEPIIM VTLAVVAVIG LYVAALITKH KKWGVLWHDW LTSVDHKRLG
IMYIVLAFIM LIRGFSDAIM MRTQQALATN GAAGYLPPEH YDQIFTAHGV IMIIFMAMPF
MIGLMNLVLP LQIGARDVAF PFLNNLSFWL TASGAVLINI SLGLGEFAKT GWVAYPPLSE
LAYSPGVGVD YYIWALQISG IGTTLTGVNF IATVLKMRAP GMKLMQMPIF TWTCTWANIL
IVASFPILTA VLALLTLDRY MGFHFFTNDG GGNAMMYINL FWAWGHPEVY ILILPAFGIF
SDVISTFTSK RLFGYSSMVW ASGAISILGF IVWLHHFFTM GSSANVNAFF GVMTMVIAVP
TGVKLFNWLF TIYRGRLRLT VPVLWTLGFM VTFTIGGMTG VLLAVPGADY VLHNSLFLIA
HFHNTIIGGA VFGYLAGFAY WFPKATGFHL NERLGKASFW CWQIGFYVAF MPLYVLGFMG
MTRRINHIDN PAWNMWIYIA AVGACIIMVG IILQFVQLYV SIRDRDQNRD TTGDPWNGHT
LEWSTASPPQ FYNFAKLPQV SDIDAFTDAK EKGTAYQRLK HYQPIHMPKN TPSGILMALG
ITAAGFAAIW HILWLAIVGM VGAFIVFLFR AYNNDVDYYV QPDEVARIEN AHLNNVVRG
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