Gene Shewmr7_3907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3907 
Symbol 
ID4257939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4643031 
End bp4643333 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content51% 
IMG OID638124596 
Productpeptidase 
Protein accessionYP_739941 
Protein GI114049391 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000603836 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.452206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTG GTTTGACACT GACCCTAGTC GCTTGCTTAT GCACCTCCTT TGGCAGCATG 
GCGGGCAATG ATAAACACGA TGATCGTAAT CAATCGCGCG GCCAAGGTGT GAAGAATGAA
CAGCGCCGCC TTGTGGTCAA CAGTCCAGAT CAGGCCGTGG CGATGGCGCA ACGTCAATAT
CGAGGAAAAG TGCTCAGCGT GCAGTCGAGT GGCTCAGGCT ATAGAGTCAA AATCCTCAAT
AACGATGGCC AAGTTTTTTC TGTTTCGGTG GATGCCGCCA CTGGGCGTGT TTCGAGGAAT
TAA
 
Protein sequence
MKLGLTLTLV ACLCTSFGSM AGNDKHDDRN QSRGQGVKNE QRRLVVNSPD QAVAMAQRQY 
RGKVLSVQSS GSGYRVKILN NDGQVFSVSV DAATGRVSRN