Gene Shewmr7_3900 details

Gene Information

• Locus tag: Shewmr7_3900
• ID: 4257932
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: -
• Start bp: 4631771
• End bp: 4635313
• Gene Length: 3543 bp
• Protein Length: 1180 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 638124589
• Product: hypothetical protein
• Protein accession: YP_739934
• Protein GI: 114049384

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.380579
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCAAAGA AGAAACAACT AAGCAATCCA TTCTCTACCG GCGGTGGGGG CGTTCATTTT 
GAAGCGCATG TCCAAGCGTC ATTTGTCGCG CTCATGCTTA CCGGCGGGCA CGCCCCCTGT 
CTTCCCTGCT GGCCCATTGC GGAAATCAAA CTTCAGGGCA AAATTGACGG CTTTGATACA 
GACGACCTCG TTGTTGTCAT AGAAAACGTA AACAGCAAGG AACGGCGGAA ACTTCTCGGG 
CAGGTCAAGC ATTCCATTGA CATCACGAGC CGCAGCGCTC TGTTTGGCGA GGTGATGCAG 
GCCGCCTGGA ATGATTTCAA TAATCCCAAG GTGTTCACAC GAGATAAGGA CATTATTGCT 
CTGATTACAG GACCACTCAG TGCGACCGAT GCACACAATG TGCAATGGTT GCTGAGCCAG 
GCGAGGCACA CCAAAAACGT TGATGAGTTT TTCAGAAACG TCCAGCAGGC GAATTTCAGC 
CCATCCAAGA GTACCGAGAA ACTGGAGGTC ATTCAGCACC ACCTGAAGGC AGCAAACGGC 
GGCAACGATG TTTCAAGGGA CGAACTCTAT GACTTCCTGA ACCACTTCCA TCTACTCGGC 
TACGATCTTG GTAACGAGTT CGGTGTTGTC CTGTCTCTAC TGCATTCCCA CATTTCCCAA 
TTCCAACAGC AGTATCCGCA GTGGGTTTGG TCACGGGTTG TCGATATTGT ACAAACATGG 
AATCAGGATG CCGGTACGAT CACGCCCGAC AAGCTGCCGG AAGACCTTCT GGATGCCTTT 
AAACAAAAGG CTGTGGCGGA GATGCCCAAG GAGTTCAAGG CGGCACAGGA GAAACCTAAA 
ATCGATTGGA CTCTGCACCC AGACGCCACC TATCTGGCAT TGGCAGTTCT GATTGGATCT 
TGGCAAGACC AGAGTCAATG CGACCTTGAA GCGATAACTC AACTGCTCGG TATCAGTTAC 
GACGAGTGGC TAAAGAAGGC CCGGGAAATA TTGCACTGCC CTGACAGTCC TTTGTCTCTC 
AAGAACGGCA TCTGGAAAGT TGTTAACCGA ACCGAGCTAT GGTGCCTGCT GGGATCGCGC 
ATCTTGGATC AGAACCTCGA TACATTTAGG TCGCTGGCTG TTTCCGTACT AAGAGAGCCA 
GACCCCGCTT TTGAACTGCC TGCCGAAGAG CGATACGCCG CAAACATTCA TGGCAAGGGG 
CTGAAGTGTT CACACGTGTT GCGAAACGGC ATTGCCGAGG GTTTGGCTAT CCTGGGCAGC 
CAGCCGGAGG CGTGCGGTAA CTGCTCACAA GGGAAGGCTG AAGCAACCTG CGTATTGGTG 
ATACGTGAAC TTCTGACCGA TGTTGACTGG GTTTTGTGGG GCAGCCTGAA CGGTTTGCTG 
CCCACCTTGG CCGAAGCCGC CCCGGGTGAA TTTCTTGATG CAGTCGAGAA GGCGATGCGT 
CTGACGCCCT GTCCTTTTGA TGAGCTTTTT TCCCAGGAAG GCAACGGCAT CACCGGCGGC 
AATTATCTAA CCGGCCTACT CTGGGCGTTG GAAGGGCTGG CCTGGGATAA ACAATATATG 
GTTCGAGTCT GTGTTGCGCT TGCTGAACTT GCCAGCCATG ACCCCGGCGG CCAGTGGGCC 
AATCGACCAT CCAATTCGCT TGCAACCATT TTGCTGCCCT GGCTGCCGCA AACGCTGGCA 
TCTGTTGATA AGCGCAAGGT GGCGGTGCGA ACGATCCTTC AGGAATGGCC GGATATTGCC 
TGGAATCTGA TCATTCAACT TCTGCCCGGC CAGCACCAGA CCTCTTTCGG AACACACAAA 
CCAAGCTGGC GCAAGACCAT CCCCGATGAC TGGGAAAAAG GGGTGACACA ACAGGAATAC 
TGGCAGCAGG CATCTTTTTA TGCGGAACTT GCGGTGGCTG CCGCTGGTCA AGATACCGCT 
CGGCTTTCCG CATTGATTGA TCATTTTGAT AACCTGCCTG AACCCGCTTT TGATCAACTT 
CTCCAGGCTC TTGCCTCCCA ACCCATTTCA GAGATCCCCG AAGAGCAACG ACTTTCGATT 
TGGGACCATC TCACGAAATT CACAAACAAA CACCGGCGGT TCGCCGATGC GAAGTGGGCA 
TTGCCCGACG AGATGATTAC CCGCATTGAA CACGTTGCCG GGCAACTCGC CCCCACCAAC 
CCTTTAAATT TATATCAGCA CCTTTTTACA GATCGTGACT TTGATCTCTA CGAAGAGAAC 
AGCGACTGGG AGGAGCAGCG AAAGAAACTC GACACCCGAC GCGAAACGGC TATTTCGGAA 
ATATTTCAGC AAGATGGTGT CCGGGGTGTA ATCCGATTTG CGGAATCCGT TTCTTCACCC 
AGTCAGGTAG GGCACGCGCT TGGCGTTATT GCCGATGATG TGTTTGAACG TGCTCTTTTG 
CCGCATTTTC TGGATTCAGC GGACAACAAG CGCAAGGCCT TGGTGAGCGG TTTTATCTGG 
AGGCGTTACC ATCTCAAAGG CTGGGAGTGG TGCGACGACC TCGATAAATC TGATTGGACG 
CTCGAGCAGA AAGGTCAATT CCTGGCTTGT TTGCCGTTTA CCAAGGAAAC ATGGGATCGC 
GCTTCTGATT GGCTTCAGGC CCACGAGAGT GAATATTGGA CCCGCACCGG TGCAAATGCC 
TACCAGGCCG ATGGTGAGCT TGCCATTGCG ATTGAGAAAC TGATTGAGAA TGGCAGGCCA 
CACGCGGCAA TCAACTGCCT AGACAGGATG CGCCATGCCA AGCAGCCAAT CGATAGTAAC 
CAATGTGTCC GAGCGTTGCT TGCAGCGCTT TCCTCCAGTG AGCCCAGTTA CGCCATGGAC 
AGGTATCACA TCGTCGAACT GATCAAGTTT CTTCAGGCAG AACCCACGTT GAACCAGGAC 
GATCTCTTTA GGGTCGAGTG GGCATATGTG CCCTTGCTCG ACCGTAATAG AGGTGCTGCG 
CCCAAACTCC TTGAAAGCAG ACTGGCCAAT GATCCCGAGT TCTTTTGCGA GGTCATTCGA 
CTGATCTACC GTTCCAAGAA AGAAGATCAG CCGTCGAGAG AACCCACCGA GGAATCAAAG 
GCAATTGCAA CAAATGCCTG GCGGCTGCTC CATGAGTGGA AGACGCCGCC GGGAACACAA 
CAAGATGGAA AATTCAGCGA AGAGCGCTTT ACTGAATGGC TCCAAAGGGT AAAGGAAGTT 
TGTACGGAAT CCGGCCATCT GGAAGTTGCA CTTATCAATA TTGGCGAAGT ATTGATTCAC 
GCCCCACCCG ATCCAGACGG CTTATGGATA CGCCGCGCTG TCGCTGCCGC ACTGAATAAC 
CGTGAAGCCG ATGACATGCG AGACGGCTAC AGGACGGGGA CATACAACTC ACGCGGTGTT 
CATTGCGTTG ACCCAACCGG AAAACCGGAA AGAGAACTGG CTGAACAGTT CCGAAGTAAA 
GCCGAGGAAA TAGAGAACGC CGGGTTTCAG CGATTTGCAG TTGTCTTGAG AGGTTTGGCG 
GACGGCTACG ACCGCGAAGC TGAACGAATA ATTAACGATC ACAAAGACCG GGAAGATGGG 
TAA 

 

Protein sequence

MAKKKQLSNP FSTGGGGVHF EAHVQASFVA LMLTGGHAPC LPCWPIAEIK LQGKIDGFDT 
DDLVVVIENV NSKERRKLLG QVKHSIDITS RSALFGEVMQ AAWNDFNNPK VFTRDKDIIA 
LITGPLSATD AHNVQWLLSQ ARHTKNVDEF FRNVQQANFS PSKSTEKLEV IQHHLKAANG 
GNDVSRDELY DFLNHFHLLG YDLGNEFGVV LSLLHSHISQ FQQQYPQWVW SRVVDIVQTW 
NQDAGTITPD KLPEDLLDAF KQKAVAEMPK EFKAAQEKPK IDWTLHPDAT YLALAVLIGS 
WQDQSQCDLE AITQLLGISY DEWLKKAREI LHCPDSPLSL KNGIWKVVNR TELWCLLGSR 
ILDQNLDTFR SLAVSVLREP DPAFELPAEE RYAANIHGKG LKCSHVLRNG IAEGLAILGS 
QPEACGNCSQ GKAEATCVLV IRELLTDVDW VLWGSLNGLL PTLAEAAPGE FLDAVEKAMR 
LTPCPFDELF SQEGNGITGG NYLTGLLWAL EGLAWDKQYM VRVCVALAEL ASHDPGGQWA 
NRPSNSLATI LLPWLPQTLA SVDKRKVAVR TILQEWPDIA WNLIIQLLPG QHQTSFGTHK 
PSWRKTIPDD WEKGVTQQEY WQQASFYAEL AVAAAGQDTA RLSALIDHFD NLPEPAFDQL 
LQALASQPIS EIPEEQRLSI WDHLTKFTNK HRRFADAKWA LPDEMITRIE HVAGQLAPTN 
PLNLYQHLFT DRDFDLYEEN SDWEEQRKKL DTRRETAISE IFQQDGVRGV IRFAESVSSP 
SQVGHALGVI ADDVFERALL PHFLDSADNK RKALVSGFIW RRYHLKGWEW CDDLDKSDWT 
LEQKGQFLAC LPFTKETWDR ASDWLQAHES EYWTRTGANA YQADGELAIA IEKLIENGRP 
HAAINCLDRM RHAKQPIDSN QCVRALLAAL SSSEPSYAMD RYHIVELIKF LQAEPTLNQD 
DLFRVEWAYV PLLDRNRGAA PKLLESRLAN DPEFFCEVIR LIYRSKKEDQ PSREPTEESK 
AIATNAWRLL HEWKTPPGTQ QDGKFSEERF TEWLQRVKEV CTESGHLEVA LINIGEVLIH 
APPDPDGLWI RRAVAAALNN READDMRDGY RTGTYNSRGV HCVDPTGKPE RELAEQFRSK 
AEEIENAGFQ RFAVVLRGLA DGYDREAERI INDHKDREDG