Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3899 |
Symbol | |
ID | 4257931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4629627 |
End bp | 4630223 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638124588 |
Product | phage integrase family protein |
Protein accession | YP_739933 |
Protein GI | 114049383 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.97558 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACTT GGCATAAAGG TCATCCCATG GGGCAAAAAC GACCTTTTAA ATTGGAAGAG ATTTGGCGCA TTCGTACTCG TTTGGAGTTA GAGCATAATA TTGCTGAGTT AGCGTTACTT AATCTGGCGA TTGATTCAAA ATTACGCGCT TGTGACTTAC TGCATTTGAA GGTTCAAGAC ATTACCTCAG CAGGCATCAT TAATCCGCGC GTGCGCTTAA CGCAACGTAA AACCCATCGT GAAGTGCAGT TTGAAATTAC GCTACCAACC CAACATTGTT TGACTTCTTG GTTGCTCGAA AAGCGGCTCA TCGCAGAAGA CTACTTATTT CCGAGCCCAA GGTGTGCTCA TCAGCCGATG AGTTATAGCT ATTACCGCGC GATAGTCAAA AACTGGGCGC GTCAGTTAGG CCAAAATAGT GAATTATACG GCACGCATTC ACTGCGCCGA ACCAAAGCCA CATTGATTTA CCGTAGGACG AAAGATATTC GAGCGATTCA AATATTACTT GGCCATGTCA AGTTAGATAA CACCGTCCGC TACTTAGGTG TTGAGATTGA AGATGCACTG CGCATATCGG AATCCATTGA GGTGTAA
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Protein sequence | MDTWHKGHPM GQKRPFKLEE IWRIRTRLEL EHNIAELALL NLAIDSKLRA CDLLHLKVQD ITSAGIINPR VRLTQRKTHR EVQFEITLPT QHCLTSWLLE KRLIAEDYLF PSPRCAHQPM SYSYYRAIVK NWARQLGQNS ELYGTHSLRR TKATLIYRRT KDIRAIQILL GHVKLDNTVR YLGVEIEDAL RISESIEV
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