| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3885 |
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| Symbol | |
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| ID | 4257917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4608085 |
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| End bp | 4610424 |
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| Gene Length | 2340 bp |
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| Protein Length | 779 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124574 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_739919 |
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| Protein GI | 114049369 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACTA TTGCCCAAAT TATTGCTCAG GAACTGAATG TTCAGGAGCA TCAAGTCACT
GCCACCATAG ATTTGCTCGA CAATGGTGCT ACCGTTCCCT TCGTTGCCCG TTACCGTAAA
GAAGCGACTG GGGGCTTAGA TGACACCCAG TTACGTACGC TGCACACTCG TTTAGGTTAT
TTGCGCGAGC TGAATGACAG ACGTCAGGTC ATTTTATCCA GCATTCAAAC CCAGGGTAAG
TTAACGCCTG AATTGCAAAG GGAAATTGAA GGCGCGGACA GCAAGACCCG CCTCGAAGAT
CTGTACCTTC CCTTCAAGCC TAAACGCCGT ACTAAGGGCC AAATTGCGAT TGAGGCGGGA
TTAGAGCCGC TAGTTGAAGC TTTACTGGCG GACCGTAATG CCGATATCGA GGCATTAGCT
GCGGGTTATC TGAATCTCGA AGCGGGCTTT GCCGATACCA AAGCCGTACT GGAAGGCGCT
CGTTATATTC TGATGGAGCG TTACGCCGAA GATGCGGAAT TACTGCGTAA AGTTCGTGAA
CACCTGAGCC AAAACAGTGT GTTAGAGAGC CGCGTCATCG CCGGAAAAGA GAAGGAAGGC
GCTAAGTTTC GCGACTATTT TGAGCACAGC GAGCCTCTGG CGAAAGTGCC GTCACACCGC
GCCTTGGCGA TGTTGCGTGG CCGCAATGAG GGCTTCTTAT CTCTATCCAT GAATGCCGAT
CCTGCTGCCG AAGCGGGTCA GGGCAGTTAC TGTGAAGTGA TCATTAGCGA GCACTTAGGC
CTAAAACTCG GCGAGAGCAG TGTTGATCAA TGGCTTAAGA CCGTTGTGAC CGCCACATGG
CGGATTAAAA TTGCCCTGCA GATGGAAACC GAGTTTATCT CGCAAATGCG TGAGCGCGCC
GAAGCAGAAG CCATTAAAGT GTTTGCCCGC AACTTAGGCG ACTTACTTAT GGCCGCACCA
GCGGGCGCTA AGGCGACTAT GGGTCTAGAC CCGGGACTAC GCACGGGCGT TAAAGTGGCC
GTGGTGGATA ACACGGGTAA GCTGGTCGCA CATACGACTA TCTTCCCCCA TGCGCCGCAG
AATTTGTGGG ACAAGTCGAT TCGTACCTTA GCCAACTTAG CGCAAATGCA TAAGGTGGAA
TTAATCGCGA TTGGTAACGG CACTGCATCA CGCGAAACTG ACAAGTTAGC GGGTGAGTTG
ATTGCCAGCC TTAAGGATAG CCAACCGCAA CTAACCAAGG TGATGGTGAG TGAGGCTGGT
GCTTCCGTGT ATTCCGCCTC AGAACTCGCC GCGCTGGAGT TCCCTGAGCT GGACGTGTCT
ATTCGTGGCG CCGTTTCGAT TGCACGCCGT TTACAGGATC CCTTAGCGGA ACTGGTGAAG
ATTGAGCCTA AGTCCATTGG TGTGGGTCAA TACCAGCACG ATGTGAGTCA AAGTCAGCTG
TCTAGCTCGC TCGAAGCCGT GGTCGAAGAC TGCGTAAACG GTGTGGGCGT GGATTTAAAC
ATGGCGTCAG TGCCTTTGCT GTCGCAGGTG GCTGGGTTAA ACAAAACCTT AGCGAAAAAC
GTGGTCGACT ACCGCGATGC CAACGGCGCC TTCAAAAACC GTAAAGAACT GCTGAAAGTG
CCACGCTTAG GCCCTAAAGC CTTTGAACAA GCCGCGGGCT TTTTGCGGAT CCGTGATGGC
GACAATCCAT TGGATATGTC GGCGGTTCAC CCCGAAGCCT ATGCGCTGGT CGAAACCATT
GCTAAGACTA AGCAAGTGGA GTTGGCGAGT CTTATCGGTA ATTCTGAGCT GCTACGCAAT
ATCAAGCCGC AGGAGTTTAC GACCCCTGAG TTTGGTTTAC CGACAGTGAC CGACATCCTC
AGCGAGCTGG ATAAACCGGG CCGTGACCCC CGTGGTGAGT TTAAAACTGC CAAGTTTAAG
GATGGGGTTG AGGAGCTTAA GGATCTGAAA CCTGAGATGA TCCTCGAGGG CGTTGTCACC
AACGTGACTA ACTTTGGTGC CTTTGTGGAT ATCGGTGTGC ATCAAGATGG TTTAGTGCAT
ATCTCATCAT TAACCGACAA ATTTATTACC GATCCCCATA CTGTGGTCAA AGCGGGTGAT
GTAGTGAAAG TGAAGGTGAT GGAGGTCGAT GTTGAGCGTC GTCGTATTGG CTTGAGTATG
CGTCTGGATG AGGCTATCGA TCAGAGCAAG GCTCAAACAC GCGGTCCATC TCAGGGTAAG
CAGCAGGCTC ATAAGGGCAA TACACAACAT AAGCCTTCGC GTCCTGCGGC AAAAGCGGCT
CCCGTCAACG CGGCCATGGG CAATGCCTTT GCCGATGCCT TCGCTAAGCT GAAAAAGTAA
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| Protein sequence | MQTIAQIIAQ ELNVQEHQVT ATIDLLDNGA TVPFVARYRK EATGGLDDTQ LRTLHTRLGY
LRELNDRRQV ILSSIQTQGK LTPELQREIE GADSKTRLED LYLPFKPKRR TKGQIAIEAG
LEPLVEALLA DRNADIEALA AGYLNLEAGF ADTKAVLEGA RYILMERYAE DAELLRKVRE
HLSQNSVLES RVIAGKEKEG AKFRDYFEHS EPLAKVPSHR ALAMLRGRNE GFLSLSMNAD
PAAEAGQGSY CEVIISEHLG LKLGESSVDQ WLKTVVTATW RIKIALQMET EFISQMRERA
EAEAIKVFAR NLGDLLMAAP AGAKATMGLD PGLRTGVKVA VVDNTGKLVA HTTIFPHAPQ
NLWDKSIRTL ANLAQMHKVE LIAIGNGTAS RETDKLAGEL IASLKDSQPQ LTKVMVSEAG
ASVYSASELA ALEFPELDVS IRGAVSIARR LQDPLAELVK IEPKSIGVGQ YQHDVSQSQL
SSSLEAVVED CVNGVGVDLN MASVPLLSQV AGLNKTLAKN VVDYRDANGA FKNRKELLKV
PRLGPKAFEQ AAGFLRIRDG DNPLDMSAVH PEAYALVETI AKTKQVELAS LIGNSELLRN
IKPQEFTTPE FGLPTVTDIL SELDKPGRDP RGEFKTAKFK DGVEELKDLK PEMILEGVVT
NVTNFGAFVD IGVHQDGLVH ISSLTDKFIT DPHTVVKAGD VVKVKVMEVD VERRRIGLSM
RLDEAIDQSK AQTRGPSQGK QQAHKGNTQH KPSRPAAKAA PVNAAMGNAF ADAFAKLKK
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