| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3880 |
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| Symbol | |
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| ID | 4257912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4602858 |
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| End bp | 4603436 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638124569 |
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| Product | putative DNA uptake protein |
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| Protein accession | YP_739914 |
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| Protein GI | 114049364 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown |
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| COG ID | [COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains |
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| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR03341] IscR-regulated protein YhgI |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTACTA TTTCCGATGC GGCCCAAGCC CATTTTGTAA AGTTGTTAGC CGATCAACCT
GAAGGCACTC ATATTCGTGT ATTTGTGATT AGTCCAGGTA CCGCACAAGC CGAGTGTGGC
GTGTCTTACT GTCCACCAGA TGCCGTTGAA AGCGATGATA TTGAATTAGA ATTCAATGGC
TTTAGCGCTA TGGTTGATGA GAAGAGTGCG CCTTTCTTAG AAGAAGCCTC AATCGACTTC
GTTACCGACC AATTAGGTTC ACAATTAACC CTTAAAGCGC CAAACGCAAA AATGCGTAAA
GTGTCTTCCG ATGCGCCATT AGCCGAGCGT GTTGAGTATG TGATCCAATC TGAAATCAAC
CCACAGCTGG CAAGTCATGG TGGTAACATC ATGTTGGTTG AAATTACCCA AGAAGGCGTA
GCAGTACTGC AGTTTGGCGG CGGATGTAAC GGTTGTTCGC AAGTTGATAT CACCCTAAAA
GATGGTATCG AAAAACAACT GTTAGATATG TTCCCTGGCG AATTAACCGG TGTGCGTGAC
GTAACCGATC ACCAACACGG TGAGCACTCT TACGCTTAA
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| Protein sequence | MITISDAAQA HFVKLLADQP EGTHIRVFVI SPGTAQAECG VSYCPPDAVE SDDIELEFNG
FSAMVDEKSA PFLEEASIDF VTDQLGSQLT LKAPNAKMRK VSSDAPLAER VEYVIQSEIN
PQLASHGGNI MLVEITQEGV AVLQFGGGCN GCSQVDITLK DGIEKQLLDM FPGELTGVRD
VTDHQHGEHS YA
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