| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3875 |
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| Symbol | |
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| ID | 4254819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4598621 |
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| End bp | 4599991 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638124564 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_739909 |
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| Protein GI | 114049359 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG CAAAATCCAC CACACTTGCG CTCCTGTTGA ATGGCACCAA GAATCGCCAA
CTGCTCGCGC TTGCCCTGCC GATGATCCTC TCCAATATCA CGGTTCCGCT GTTGGGATTG
GTCGATACGG CTGTCATCGG GCATTTAAGT GACGCCTATT ATTTAGGGGG CGTCGCACTC
GGGTCAACGA TTATCACATT AATCATTTGG TTATTAGGCT TTTTACGGAT GGCGACCACC
GGATTGGTCG CACAGGCCTA TGGCGCAAAC GATACCGCGC GCCAATTAAA GTTGCTGGTC
CAAGGCGCCA TGTTGGCGGC TGGGCTGGGT ATCGCGGTGA TCCTATTACA GATCCCGATA
CTGAATTTAG CGCTCGGCCT CTCCGAGGCG AGTGTGGAAG TGGAGCGTTA TTGCCGAGAA
TATTTTCAGG TCCGAGTCTG GTCGACGCCA TTCGCCCTGC TCAATTTAGT GATGCTCGGC
TGGCTCCTTG GCAGACAACA ACCTAAGGCG GCCATGTGGC AGCTCATCTT CGCCAATCTG
GCCAATATTA TCCTCGATGT GTTGTTCGTC TTAGGTTTAG GCTGGGGAAT CAAAGGGGCT
GCACTTGCCT CATTATGCGC CGATATCACC GCCTTTAGCG TTGCGCTCTA CATGGTATTA
CAACAGCTTA AGTTAATACC TCGATTCCAA TTTGCCGATA TTAGAGTTCA CCTGAACTTG
TCGGGTTACG GCCAGCTGCT AAGGCTCAAT ACCGATATTT TTATCCGCAG CCTATGCCTG
CAAGCCGCCT TCGCCTTTAT GACTTTTCAC GGTGCAGGCC TTGGGGATAA TACGGTCGCA
GCCAATGCGG TCTTATTGAA TTTACTGTTA TTAATCGCCT ACGCCCTCGA TGGCATAGCC
TATTATGCCG AGGCGGAAGT GGGCAAGGCC TACGGGCAAC AACGCACACA GCCACTGCGT
GAAGCTGTGC TCCTCGCCTG GTGTTGGTCA GCCATCACAG CCCTAGGTTT TAGCCTGATA
TTTTATCTTT TGGGAGACCA TATCATCGGG CTGCTAACCA ATATTGATGA GGTGAGAACC
ACAGCGCAAA TTTATCTGCC TTGGCTGATA TTACTGCCGC TTTGGTCTTT TAGTTCCTAT
CTGTTTGATG GGGTTTATAT TGGCGCCGCT AAGGGTAAAG TGATGCGTAA CAGTATGATT
ATTGCGACAT TTGGCGCCTT CTTCCCGACA TGGTATTTGC TGCAATCGCT ATTGCCTTCC
GAACAAGCTA ACCATGCACT GTGGGCGGCC ATGACGGCCT TTATGCTAAC GCGCAGCCTC
ACCCTAGCGG CACATTATCG CTTTAGCAAG GCGTTCAAAC TGTACTATTA G
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| Protein sequence | MTTAKSTTLA LLLNGTKNRQ LLALALPMIL SNITVPLLGL VDTAVIGHLS DAYYLGGVAL
GSTIITLIIW LLGFLRMATT GLVAQAYGAN DTARQLKLLV QGAMLAAGLG IAVILLQIPI
LNLALGLSEA SVEVERYCRE YFQVRVWSTP FALLNLVMLG WLLGRQQPKA AMWQLIFANL
ANIILDVLFV LGLGWGIKGA ALASLCADIT AFSVALYMVL QQLKLIPRFQ FADIRVHLNL
SGYGQLLRLN TDIFIRSLCL QAAFAFMTFH GAGLGDNTVA ANAVLLNLLL LIAYALDGIA
YYAEAEVGKA YGQQRTQPLR EAVLLAWCWS AITALGFSLI FYLLGDHIIG LLTNIDEVRT
TAQIYLPWLI LLPLWSFSSY LFDGVYIGAA KGKVMRNSMI IATFGAFFPT WYLLQSLLPS
EQANHALWAA MTAFMLTRSL TLAAHYRFSK AFKLYY
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