Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3874 |
Symbol | |
ID | 4254818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4597553 |
End bp | 4598599 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124563 |
Product | polysaccharide deacetylase |
Protein accession | YP_739908 |
Protein GI | 114049358 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAAC GTGCGTTATT GGCACTCTTA GGGCTGATGA CTTTCTCGGC CCATGCTGTG GTCATTTTAC AGTATCACCA TGTGTCAGAA ACCACGCCGG CGGCGACGAG CGTCACGCCT GCACAATTTC GTGAACAAAT GCAGTTTCTG GCGGACGATG GTTTTAAGGT TATTCCCTTA TCCCAAGTGG TTGAGGCGAT CAAAAACAAG CAAGATTTAC CCGCCAAAAC GGTGGCGATC ACCTTCGATG ATGGTTATCG CAGCATCGCG ACCACAGCGC ACCCTATCCT AAAGGAATTT GGTTTTCCCT ACACCCTATT TGTGGCAATT GAGCCGATTA AACAAAAGTT TACCGAGATG ATGACCTGGG AAGATCTGAT TAAGCTCTCC AAGGAAGGGG CTGACATTGC TAACCACAGC TGGGCCCATG AGCATCTGAT CCGCAGGCTA GACAATGAAT CTCCAAGCCA ATGGCTAGCG CGAATTAAAG CCAATATTCA GAATACCGAA AACGCGATTC GTGAGGCGAC GGGGCAGAAC TTTAAAATGC TGGCCTATCC CTATGGCGAA TACAATCAGG CGATTCAAGA CATGTTGACC GAAAATGGCT TTGTTGCCTT TGGCCAGCAG TCAGGTGCGG CAGGGCCTTA TTCGCCACTC ACGGCGCTGC CGCGCTTCCC TGTGGCGGGG CAATATGCGG ATCTAAAGAG CCTAAAAGCC AAGTTATACA GCCTCAATAT GCCAGTGCTT GAGCAAACGC CTAGCGATCC TGAGCTGAAG GGCGGACATT GGCGCCCTGA GCTTAAGGTT AAGCTGGATA TGAGCGATAT TTCGGCCAAG CAGGTCATGT GTTATATCCA AGGGCAAGGC GCTAAAACAC CCACTTGGAG CAGTGATAAT GAATTTAGTA TTCAAGCCGA TTTAGCCCTG CCAGCGGGTC GCTCGCGCTA CAATTGCACG GCACCAAGCA AGACGCGCAA CGGCTATTAC TGGTTTTCGC AGGCATGGGT GAGACCCAAA GACGACGGCA CTTGGGTTAA AGAGTAA
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Protein sequence | MVKRALLALL GLMTFSAHAV VILQYHHVSE TTPAATSVTP AQFREQMQFL ADDGFKVIPL SQVVEAIKNK QDLPAKTVAI TFDDGYRSIA TTAHPILKEF GFPYTLFVAI EPIKQKFTEM MTWEDLIKLS KEGADIANHS WAHEHLIRRL DNESPSQWLA RIKANIQNTE NAIREATGQN FKMLAYPYGE YNQAIQDMLT ENGFVAFGQQ SGAAGPYSPL TALPRFPVAG QYADLKSLKA KLYSLNMPVL EQTPSDPELK GGHWRPELKV KLDMSDISAK QVMCYIQGQG AKTPTWSSDN EFSIQADLAL PAGRSRYNCT APSKTRNGYY WFSQAWVRPK DDGTWVKE
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