Gene Shewmr7_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3870 
Symbol 
ID4254814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4594331 
End bp4594876 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content51% 
IMG OID638124559 
Producthypothetical protein 
Protein accessionYP_739904 
Protein GI114049354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTCCC AACAAACAGC CAAATACCGC GCATTGGGGT TATTGCTACT GGCCTTTATC 
GCGCCTGTGG TCATTGCTAA GTTAGTGCTG AGCATGCATT GGTATCAAGG CGGCTCCACC
AACCACGGTG AGCTCATCAG CCCAGAAACC AGTTATACCA GTCTTGGCCT TAACAATCCT
CAGCCTAAGG AATGGCAACT GTTGTATTTA TTGCCCGCAA AGTGCGATGA GGCTTGCCGC
GAGCGCTTGT ATATCCTGCG CCAGAGTCAT ACCGCCTTAG GGCCAGATCA GGCTCGTGTC
GAACCGCTTA TTCTTGTGAA TCCAGACAGT GACTTAAGTG CATTAAGCAG CTTTAACTTC
AACACTCAAC CCGCCAGTCA AAGCCTCATT CAATGGCTTG ACCAACAGCA GCTGATTATT
GTCGATCCAC TCGGCACACT CGTGCTGCGT TACCCCCAAG TGCAAGGCAA GGCGGCACAT
TTAGCTCAGG GTAAGGCCTT GGTCGCGGAT CTGCGTAAGT TATTGAAACT ATCGAGGGTA
GACTAA
 
Protein sequence
MDSQQTAKYR ALGLLLLAFI APVVIAKLVL SMHWYQGGST NHGELISPET SYTSLGLNNP 
QPKEWQLLYL LPAKCDEACR ERLYILRQSH TALGPDQARV EPLILVNPDS DLSALSSFNF
NTQPASQSLI QWLDQQQLII VDPLGTLVLR YPQVQGKAAH LAQGKALVAD LRKLLKLSRV
D