Gene Shewmr7_3866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3866 
Symbol 
ID4254810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4591695 
End bp4592276 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content51% 
IMG OID638124555 
Productcytochrome C oxidase assembly protein 
Protein accessionYP_739900 
Protein GI114049350 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3175] Cytochrome oxidase assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCA AACCCCATCA GCCCAACATC AAGTCCAACC GTAAGCTCAT CAGCCTGCTG 
GTGCTGGGCT GCCTTGGGAT GTTTGGCTTT GGGTTCGCCT TAGTGCCGCT CTACGATGTG
TTGTGCGAAA AACTGGGTAT TAATGGCAAA ACCTCTAATA CTGCCAGCAG TTATCAAGCG
ATCACTGTGG ATAAGAACCG CGTGGTAACG GTGGAGTTTA TCTCGCAGGT GCAGACGGGC
ATGCCGTGGA AATTTGAGCC ACAAACGAAA CGGCTCGAAG TGCATCCAGG AGAGCTTATC
CACACGGCAT TTCTGGCGCA AAACGTCTCT AACAGAGCGA TCGTTGGCCA GGCGATTCCC
TCTATTTCGC CCGGACAAGG TGCGGCTTAT TTCAATAAAA CCGAATGTTT TTGTTTTAAC
CAACAACACT TAGCCGCCGC GAGTCGCGCC GAGCTGCCGT TGATCTTCTT CGTGGATCCT
CAATTACCCG AGTCTATCCA CACCTTAACC CTCTCTTACA CCCTCTACGA CATTACCGAC
AAGCAGTTAG CGTCTGCCAT AGAGCAAGGA GCTGCAAAAT GA
 
Protein sequence
MQGKPHQPNI KSNRKLISLL VLGCLGMFGF GFALVPLYDV LCEKLGINGK TSNTASSYQA 
ITVDKNRVVT VEFISQVQTG MPWKFEPQTK RLEVHPGELI HTAFLAQNVS NRAIVGQAIP
SISPGQGAAY FNKTECFCFN QQHLAAASRA ELPLIFFVDP QLPESIHTLT LSYTLYDITD
KQLASAIEQG AAK