| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3861 |
|---|
| Symbol | |
|---|
| ID | 4254805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4584430 |
|---|
| End bp | 4586853 |
|---|
| Gene Length | 2424 bp |
|---|
| Protein Length | 807 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638124550 |
|---|
| Product | glycerol-3-phosphate acyltransferase |
|---|
| Protein accession | YP_739895 |
|---|
| Protein GI | 114049345 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2937] Glycerol-3-phosphate O-acyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.761394 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAC AAGACTCTCT TTGGTTGAAA TCATTACGCT GGATCCAAAA GCACTTAGTG
CACACTATTG TTGTGCCACA GGATCCCTTT GCCGATCTGA ATCTGGACGC TTCCAGACCT
CTTGCTTATG TAATGAAAAC AGAATCCCTC AGTGATATTG CTGCCTTAAG CGAGATCACT
ACTAAACTGG GTTTGCCAAG CCCCTACGAG CCGCTCGTGG TAAATGGCGT TGTCGCGCCC
CGGGTAGTTT GCCTCGAAGG GCGTAAGCCT TTGTTTGGTG AACGTGCCAG TAATGAGCCA
TTCCTCGAAT GTTTTATGCG CCTGTTGGCT GTCCATAAGG AAAAGCCAGA GTTAGATATT
CAGCTGGTGC CTGTGAGTCT GTATTGGGGC CGTACTCCGG GTAAAGAAGA CGACACCATG
AAGGCAGCGG TGCTTGAGCG CGAGAACCCA ACTTGGTTAC GTAAGTGCTT GATGATCCTA
TTTTTGGGAC GTCACAACTT TGTGCAGTTT TCTAATGCAG TATCGCTGCG CTATATGGCC
GACGAGCACG GTACCGATAT GGGTATTGCC CATAAATTGG CACGAGTAGC TAGAGTGCAT
TTCCGCCGTC AGCGCAAGGT GATGACGGGA CCTGTACTGC CAAACCGTCA GGCGTTATTC
CATTCGCTGC TGAAATCCGA ATCCTTACGT AAGGCGATTC AAGAAGAAGC GGCGAGTAAG
AAGATTTCTG AAACCCAGGC TCGTGAAACG GCAATCGAAT ATCTTGATGA AATCGCAGCC
AATTATTCCG ATAGCTTAGT GCGTATTGCC GAGCGGTTCT TAACTTGGTT ATGGAACAAG
CTCTATAGCG GTATCAATAT CAAAGGTGCC GAGCAAATCC GCCAGCTGCA CCATGATGGT
CATGAGATTG TTTATGTACC TTGTCATCGC AGCCATATGG ATTACCTGCT GTTATCCTAC
ATTCTGTATT ACCAAGGCAT GGTGCCACCG CATATCGCGG CGGGGATTAA CCTAAACTTC
TGGCCTGCGG GGCCGTTGTT CCGCCGTGGC GGGGCTTTCT TTATTCGCCG AAGTTTTAAC
GGCAATAAAC TTTATACGGC CGTGTTCCGT GAATACCTCG ATCAGCTGTT TGCTAAGGGA
TATTCGGTTG AGTATTTCTC TGAGGGTGGC CGTTCTCGCA CCGGTCGTTT GTTGGCGCCG
AAAACGGGCA TGATCGCCAT GACGATCAAC AGTGTGTTAC GTGGCATCGA ACGCCCTGTC
ACCTTAGTGC CTGTGTATTT AGGCTACGAT CACGTGATGG AAGTAGCGAC TTATCATAAA
GAGTTGAGTG GTAAGAAAAA ACAGAAAGAG TCTGTGTGGC AAGTCTTTGG TGCTATTCGT
AAATTAGGTA ATTTTGGCCA AGGTTATGTG AACTTTGGTG AGCCAATTAC ACTGCAAAAC
TTCTTGAATG AAACGGCCCC TAACTGGCGC ACCGAAGTGG CTGATGATCC TGAGCAAAAA
CCGACCTGGT TAACCCCTGC AGTGAACGTG TTGGCGAATC GCGTGATGAC CCGGATTAAC
GATGCCGCCG CCGCCAGTTC TATCACCTTG ACGAGCTTAG TGTTGTTGGC GTCGGAGCAA
AATGCCTTAG AGCGTTGTTT GCTCGAGCGT CAATTAGATT TATACCTGAC CCTGCTTAAG
CGTGTGCCTT ACACTTCGTT TACGTCGGTG GCCGAAGGTG ATGGCAAACA TTTAGTGCAA
CAAGGATTGG AGCTAAATAA GTTTTCCATC AGTGCCGATC CTTTGGGTGA GATAGTGTCT
ATTGATGCGA ACCAAGCGAT AACAATGACT TACTATCGTA ATAACATCAT CCACTTGTTT
ATCATCCCGT CGTTAATTGC CAGCTGTTTA ACCAACAATA AACAGATTTC AAGGGCGAGT
ATTCTTGGGA TTGTGAATGA CTTCTATCCG CTACTGAAGG CGGAGTTATT CATGGGTATC
AAGGACCTCC CAAGTTATGT GAATCAAGTG CTGGATCTGT TTATTGAGCA GGGTCTGGTG
CAGGAAAGCG ATACGCTGTC GGTGGTGACC GAGCGCACCA GCCAAATGTT GTTGCTGGCT
GGAAGCGTTA GCGAAACCTT GCAACGCTAT GCGATTATCT TCAATCTGCT GGCCCACAGA
CCTAAGATGG AGCGTTCGGA GCTGGAGTCT GAAAGCCATC TGCTTGCCCA ACGTTTAGGG
GCGCTGCATG GAATTACCGC GCCAGAATTC TACGACAAGA AACTCTATAA CACCTTGAGT
GTTAAGCTTA AAGAGTTGGG TTATTTCTCC GAGAAGGAAG ATAAATCCGA CGTTGAACGC
ATTCGCGATC AAGCCAATAG CTTGCTCAGA GCCTCAGTGA GACAAACCAT AGTTGCGAGC
GTGACCGCGG AGCATATCGT TTAA
|
|---|
| Protein sequence | MPKQDSLWLK SLRWIQKHLV HTIVVPQDPF ADLNLDASRP LAYVMKTESL SDIAALSEIT
TKLGLPSPYE PLVVNGVVAP RVVCLEGRKP LFGERASNEP FLECFMRLLA VHKEKPELDI
QLVPVSLYWG RTPGKEDDTM KAAVLERENP TWLRKCLMIL FLGRHNFVQF SNAVSLRYMA
DEHGTDMGIA HKLARVARVH FRRQRKVMTG PVLPNRQALF HSLLKSESLR KAIQEEAASK
KISETQARET AIEYLDEIAA NYSDSLVRIA ERFLTWLWNK LYSGINIKGA EQIRQLHHDG
HEIVYVPCHR SHMDYLLLSY ILYYQGMVPP HIAAGINLNF WPAGPLFRRG GAFFIRRSFN
GNKLYTAVFR EYLDQLFAKG YSVEYFSEGG RSRTGRLLAP KTGMIAMTIN SVLRGIERPV
TLVPVYLGYD HVMEVATYHK ELSGKKKQKE SVWQVFGAIR KLGNFGQGYV NFGEPITLQN
FLNETAPNWR TEVADDPEQK PTWLTPAVNV LANRVMTRIN DAAAASSITL TSLVLLASEQ
NALERCLLER QLDLYLTLLK RVPYTSFTSV AEGDGKHLVQ QGLELNKFSI SADPLGEIVS
IDANQAITMT YYRNNIIHLF IIPSLIASCL TNNKQISRAS ILGIVNDFYP LLKAELFMGI
KDLPSYVNQV LDLFIEQGLV QESDTLSVVT ERTSQMLLLA GSVSETLQRY AIIFNLLAHR
PKMERSELES ESHLLAQRLG ALHGITAPEF YDKKLYNTLS VKLKELGYFS EKEDKSDVER
IRDQANSLLR ASVRQTIVAS VTAEHIV
|
|---|
| |