| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3855 |
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| Symbol | |
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| ID | 4254799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4573962 |
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| End bp | 4575470 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124544 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_739889 |
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| Protein GI | 114049339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAT TTAATAAAGT AAAAAAGCCG AGCACTAAGG CGATATTGAT ACTCAGCAGT
CTGCTGTTGG GGACGCCTTG GTTAACCCAA GCGCAGCTCG TTAACACCGC AGCTCAAACT
GAAGCGGGCC ACGAGCATGC AACCAATAGC AGTAAAACCA ATCAGGTAAA AACCTACACT
TGCCCTATGC ACCCCGAGGT GGAGAGCCAC GAACCCGGCC GCTGTCCTAA GTGCAATATG
TTCCTCGTCG AAAAGGAAGA AGAGGAAGAG GCCGGCACAA CCGCCCAACA TGCGGAGCAT
CAAGCCAGCA GCGCCAGTCA AAATGCGGCG CAAGTATTTG AAACACCAAC GCCTAAGGCT
GATAACTTAG CTAAAAATCA AAGTTCAGGG GCAACCATTA AGTATGTGTG TCCTATGCAC
GCCCACATCA TTAGCGATGT GCCAGGCACT TGCCCTATCT GCGGTATGAA TTTAGAGAAA
GTCGAAACCG GCGGCAATAC TCAGGAAATT AACATCAATG TATCTGGCAG CATGCAGCAG
GCGCTCGCGC TGAAAGTCGC CGAAGTCAAA CGCGATACCC TGTGGAAGTT TGTCGAAACC
GTGGGCCAAA TCGACTACGA CGAGAGCCAA ATTAACCATG TGCATGCCCG CGTCACGGGC
TGGATTGAGA AGCTGATGAT CAAATCCGTT GGCGACTCAG TCAAAAAAGG ACAGTTGCTA
TACGAAATCT ATTCACCCGA TCTGATTAAC GCTCAAGATG ACTATCTGTT AGCGCTCGAT
ACCTCTAAGG CTTCGGGCAA TAATAACCGT TACCAAGATT TAGTGCGTAA AGCGGGGCTG
CGTTTGTCAT TACTGGGGAT GAATGAAAGG CAAATTCAAC AACTCGCAGA CACAGGTAAG
ACCCAGTACC GCGTGCCTTT CTATGCCCTG CAAGATGGCA TAGTCAAAGC ACTCGATGTG
CGTGATGGCA TGTATATCCA ACCTTCAACC GAGGTAATGT CAATTGTCGA CCTCTCCAAA
GTGTGGGTGA TTGCCGATGT GTTTGAAAAT GAACAAAGCT GGATTGCCCT AGGGCAAAAG
GCCGAAGTCT CTGTTCCCGC GATGAATATC AGCGGTATCG AAGGCACCAT TGACTATATC
TACCCCGAGC TAGACCCCAT CACTCGCAGC TTGAGAGTCC GTGTGGTGCT GAATAATACC
GATGTTTCCC TAAGACCTAA GACACTCGCC AAGGTCTCTC TCTTCGGTGG CCCAAATAAA
GATGTGTTAG TGATCCCGCA GGAAGCACTC ATCCAAACGG GTAAAGAAAA CCGCGTGATA
GTGAAACAGG CCGACGACAG CTTTGCCGCT AAGGCCGTGA CTGTAGGCAT GATGAGCCAA
GGTAAGGCCG AGATAGTATC GGGCCTCAGT GAAGGTGAGC GCGTCGTGAC GTCAGGACAA
TTCCTGCTCG ACTCCGAAGC CAGCCTCAAG GGCAGCTTAA TGCGTTTAAG CAGCGGCCAT
CAGCACTAG
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| Protein sequence | MKQFNKVKKP STKAILILSS LLLGTPWLTQ AQLVNTAAQT EAGHEHATNS SKTNQVKTYT
CPMHPEVESH EPGRCPKCNM FLVEKEEEEE AGTTAQHAEH QASSASQNAA QVFETPTPKA
DNLAKNQSSG ATIKYVCPMH AHIISDVPGT CPICGMNLEK VETGGNTQEI NINVSGSMQQ
ALALKVAEVK RDTLWKFVET VGQIDYDESQ INHVHARVTG WIEKLMIKSV GDSVKKGQLL
YEIYSPDLIN AQDDYLLALD TSKASGNNNR YQDLVRKAGL RLSLLGMNER QIQQLADTGK
TQYRVPFYAL QDGIVKALDV RDGMYIQPST EVMSIVDLSK VWVIADVFEN EQSWIALGQK
AEVSVPAMNI SGIEGTIDYI YPELDPITRS LRVRVVLNNT DVSLRPKTLA KVSLFGGPNK
DVLVIPQEAL IQTGKENRVI VKQADDSFAA KAVTVGMMSQ GKAEIVSGLS EGERVVTSGQ
FLLDSEASLK GSLMRLSSGH QH
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