Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3848 |
Symbol | |
ID | 4254792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4570005 |
End bp | 4570652 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124537 |
Product | putative methyltransferase |
Protein accession | YP_739882 |
Protein GI | 114049332 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.493738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAATA ATCGTGCAAA CAACAAGCAA GTGACCAAGA GTCAAACGGC CAATAAGAAA GCCGGTAGTG GCCAAGTGCG GATCATTGCC GGGCAATGGC GTTCGCGCAA ACTGCCCATC CATGATTTAG ACGGCCTGCG GCCGACCACA GATAGAGTCC GCGAAACCCT CTTTAACTGG CTTGCCAATG ATATTGCCCA TGCAAGGGTG CTCGACTGCT TTGGTGGCAG CGGCGCCTTG GCGCTTGAGT CTCTCTCACG CTATGCCAGT TATGCCAAGA TTATCGAGCT GCAACGTCCT GCCGCCATGC AACTTAAAGC GAATCTCAAT ACCCTCAAGT GCGACAATGC CGAGGTACTC AACGCCGACA CTCTAGTCGT GCTGCAAAAT GGCTGCGACC AAGGGTTTGA CGTGGTGTTT ATCGATCCGC CTTTCCGCAA AGGCTTAGCA GAAAAAACCA TTCAACTTTT GGACAGCCAA GGTTGGCTTA ATGATGGCGC GCTAATTTAT GTGGAGATTG AGTCGGAATT AACTCAAATG GCAGTACCAG CGACTTGGCA ACAGCTCAAA GACAAGACCG CAGGGCAAGT CAGCTATCGC TTATATCAAT ACCAAGCCGA AGACTCTCAG GCGAACACCA AGGAATAG
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Protein sequence | MANNRANNKQ VTKSQTANKK AGSGQVRIIA GQWRSRKLPI HDLDGLRPTT DRVRETLFNW LANDIAHARV LDCFGGSGAL ALESLSRYAS YAKIIELQRP AAMQLKANLN TLKCDNAEVL NADTLVVLQN GCDQGFDVVF IDPPFRKGLA EKTIQLLDSQ GWLNDGALIY VEIESELTQM AVPATWQQLK DKTAGQVSYR LYQYQAEDSQ ANTKE
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