Gene Shewmr7_3842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3842 
Symbol 
ID4256829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4562659 
End bp4563708 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID638124531 
ProductO-succinylbenzoate synthase 
Protein accessionYP_739876 
Protein GI114049326 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1441] O-succinylbenzoate synthase 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.814694 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTAA CGTCGCTCAG CTTGTACTTA TATCGCCTGC CCTTAGACCG CTTTTTACCC 
GTGGGGAAAC AGCGCATCGA CCACAGAACG GGCTTAGTGT TGCAGGCAAA GGCACAAGCA
GAGGGTGAAG AAAGCGACCC ACTTGTTGAA ATCGCGCCAC TCTCAGGGTT TGATATCGAC
CAGCAGCCAT TGTCCGGTTT TAGCCGCGAG AGCCTAGACG ATGTACAACA GGCCTTAGTG
GCACTATTGC CCAAGCTGCA TAACCAGCCT ATCGATTACT TACTCGAGCA GGCCGAAGCG
AGCTCTTATC CGTCCATTGC CTTTGGCTTG AGCCTATTGC ACGCTAAACT CAGCGGAAAA
CTCGAGTCGG TACGGCCTGT CACAGCTACT GTGCCGTTGA TTTATCAGCC AGCGGATGCG
CCCAAAACTG AATTGATCGC TAACATTGCG AGTCTTGATA GCGGCGTGCA CTCAGTCAAA
GTGAAAGTCG CGCAAACCTC CATGGAAGAT GAGTTAAACC TGATTTATGG CATCTTAGGC
CAGAGACCCG ATCTCAAGCT GCGCTTAGAT GCTAATCGCG GCTTTAGCTT AGAACAGGCC
CTCGATTTTG CCGCCTGTTT ACCACTAGAG AGCATTGAAT ATATTGAGGA GCCGTGCCAG
CATCCGCAGG ATAATCAAAC CCTGTATCGC GCCATTCCTC TGCCCTACGC CTTAGATGAA
TCCCTCAATG ATCCGGATTA TCAATTTGTG ATGCACGAGG GGCTCACGGC GCTCATCATC
AAACCCATGC TACTTGGCAG TATTGAAAAA CTTCAGCACC TTATCGACGA GGCCCACTGC
CATGGCGTGC GCTGTATCTT AAGCTCAAGT CTTGAGGCCA GTTTAGGCAT CAATGACTTG
GCCCATTTAG CCGCCATACT GACGCCCGAT GAAATCCCAG GGCTCGATAC GTTAGCCGCC
TTTAGCCAAG ACTTAATCGC GCCAAGCGGC AAGTCTCAAT GCTTGAAGCT TCATCAACTT
AAACTTGTCG CCAGTACGCA GCAGGATTAA
 
Protein sequence
MILTSLSLYL YRLPLDRFLP VGKQRIDHRT GLVLQAKAQA EGEESDPLVE IAPLSGFDID 
QQPLSGFSRE SLDDVQQALV ALLPKLHNQP IDYLLEQAEA SSYPSIAFGL SLLHAKLSGK
LESVRPVTAT VPLIYQPADA PKTELIANIA SLDSGVHSVK VKVAQTSMED ELNLIYGILG
QRPDLKLRLD ANRGFSLEQA LDFAACLPLE SIEYIEEPCQ HPQDNQTLYR AIPLPYALDE
SLNDPDYQFV MHEGLTALII KPMLLGSIEK LQHLIDEAHC HGVRCILSSS LEASLGINDL
AHLAAILTPD EIPGLDTLAA FSQDLIAPSG KSQCLKLHQL KLVASTQQD