| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3841 |
|---|
| Symbol | |
|---|
| ID | 4256828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4561833 |
|---|
| End bp | 4562636 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638124530 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_739875 |
|---|
| Protein GI | 114049325 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.819174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCG TGGCCCGTTA CGGGGAAGTC TCGCAGCCAA ACTTAGTCCT GCTTCACGGC
TTTTTAGGGA CTAAAGCCGA TTGGCTGCCG CTTATTCCCG AACTGAGCCA GCATTTTCAC
TGTATCTGCC TCGATTTACC CGGACACGGC GATAATCAGA ACGAGCAGCC ATCGACGCTC
ACCAATGGTT TCGAGCATTG TGTTCAAGAC ATTATCAGCA GACTCGATCG CCTTGGTATT
GAATCCTTTT TTCTATACGG TTATTCCCTC GGCGGCCGCA TCGCTCTGCA CCTTGCCAAG
GCCTATCCGC AGCGCGTTTT GAGCTTATGG CTAGAGTCCT GTCATCCCGG GCTAACCGAT
ACCGCAGAGC AAGCCGCACG CAGTAAAAAC GACAACCTGT GGGCCAAACG CTTACTCAGC
TTAAGCAGTC GGGATTTTTT ACAGCTTTGG TATCAACAGG CGGTGTTTGC CGATATGTCC
GATAAGGCGC GGCATGCCTT GATAGCAAAG CGTGCGACGC TGCTCGACCA ACATCCCAAG
CAGACACTAA AACAGATCTT TCTGGCTACA TCCCTGGCTC GCCAAGCCTC TCTCTGGGAT
GTACCTGCAA GCCTTGGCTG TGAATGCCAT TTTTTTGCGG GCAGCCAAGA TGCGAAATTC
ACCGCCATAG CAAAAGATTG GCAAGCACAA CAGCCCATCA TCTTGCATCA GATTGAACAG
GCTGGGCATA ACATACATCA CGCCAATCCC GCGGCATTAG TCGCCTGCTT AAGCGCACTA
AAGCTTAGAA AATCGATGAC TTGA
|
|---|
| Protein sequence | MPTVARYGEV SQPNLVLLHG FLGTKADWLP LIPELSQHFH CICLDLPGHG DNQNEQPSTL
TNGFEHCVQD IISRLDRLGI ESFFLYGYSL GGRIALHLAK AYPQRVLSLW LESCHPGLTD
TAEQAARSKN DNLWAKRLLS LSSRDFLQLW YQQAVFADMS DKARHALIAK RATLLDQHPK
QTLKQIFLAT SLARQASLWD VPASLGCECH FFAGSQDAKF TAIAKDWQAQ QPIILHQIEQ
AGHNIHHANP AALVACLSAL KLRKSMT
|
|---|
| |