Gene Shewmr7_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3834 
Symbol 
ID4256821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4555214 
End bp4555645 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content52% 
IMG OID638124523 
ProductAsnC family transcriptional regulator 
Protein accessionYP_739868 
Protein GI114049318 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATAAGT TTGATACCGC CATCATCCAC AGCCTGCGAC AAGATGCCCG CCAGAGTGTC 
TCCAGTATCG CAGAGCAGGT TAACCTTTCC CGTAGTGCAG TTGCCGAGCG GATAAAAAAA
CTCGAGCAAA CTGGGGTGAT CCGCGGCTAT CAGGTTTTGC TGAGCGAATC GCAAAAGGAA
GGAGTGTCGG CCTATTTCGA AATCCAGCAT AAATGCCCGC GCTGCGCCGA TGTGGTGCAT
GTGTTCCATG CCATCCCCGA GGTGATCACT TGCCGCGGTA TCTCTGGCGA TATGGATTTA
CTGGTGTATG TGCACGCCCC GTCGATGCGC CGCTTGCACG AAATTCGTGA ATATATCGAT
ACCCACACGG ACATCATTAA AATCAAAACC CATGTGGTGA TGAGCGAGTG GATAAATAAC
GCGGGTGAAT AG
 
Protein sequence
MDKFDTAIIH SLRQDARQSV SSIAEQVNLS RSAVAERIKK LEQTGVIRGY QVLLSESQKE 
GVSAYFEIQH KCPRCADVVH VFHAIPEVIT CRGISGDMDL LVYVHAPSMR RLHEIREYID
THTDIIKIKT HVVMSEWINN AGE