Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3833 |
Symbol | |
ID | 4256820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4553718 |
End bp | 4554986 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124522 |
Product | inner membrane protein YjeH |
Protein accession | YP_739867 |
Protein GI | 114049317 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTCAC ATAGCGGAAC TATAGGACGT TGGCAAGGCG CAGGCTTGAT GGCCACCACT TTGCTGGGCA CAGGGGTGTT TATTCTCCCG CAAATGACAA TCGACAAGGC CCAGGCTGGC GCGCTTATCG CATGGTCACT CCTAACCTTA GCCATTATTC CGGTGGCACT GATTTTTGGT CGATTGGCGA GTGTCTTTCC CCATGCTGCG GGTCCCGCTT ATTTTGTCGA AAAGGCTTTT GGTCGCACCG CTGGCCGTAC TATTGGGCTG ATTTTTTTAC TGGTGGTGCC CATGGGTGCG CCAGCCGCGA TTTTGATGAC CTTCCAATTT GTTAATGCAC TCATTCCCCT CGATGGCTGG TCTAAGGTTG GCGCTGAGGT ATTAGTGATA TTCGGCTTAT TTCTGCTCAA TCTACGTGGC ATTCAAGTCT CGGCCAAACT GCAATTTGGC TTAACCCTTT GTATTGTGGC TATTGTGGTG CTGTTATTCG GGGCGAGTAG TGTGCAACCT GGGCACTTAA CCTCATTAGC GAGCTATGGC ACGCCAGAAA TCCCCACCAT TATGATTGCC GCAGGTATCG CCTTTTGGAG TTTCCTTGGG ATTGAGGCCA TGACTCACCT CGCCGATGAT TTTCGCCGTC CGCAGCAGGA TATGATCCCA GCGATGATGA TGGGCACTGT GCTGGTGGGC ATTATTTATG TGGCCTGTAC CTTGATTTTA CTGTTAGTAC CGACCGATAA AAGCGTGGCC ATGATTGGCG TGTTCGATAC GCTCTTGGGC GGCTATGGCG CACAAGTGAT TGGTGTGCTG GGGATTGCCA GCGGTCTTGC CACGGTCAAC GTGTATGCCG CCAGTGCCGC GCGCCTTATC TGGAGCTTTA GTAACGAAGG TATTTTGCCG CGCTGCTTTG CAGTAAAAAA TCGTCACGGT GTGCCAATCC GCGCCTTGGC GGCGTTACTC GGCGTGATGG CGAGTGTAAT AGTGCTGACC CACACCACGG GCCAAGAGCT CGAACATTTG ATTGCCTGGA GTAATGGGGT GTTCGTGGTG ATCTACTTAA TGGCGATGTT AGCCGCGGCT AAGCTATTGC CCCGCAGCAA CTTACCCTTA GTGGTATTAG GTTGTGGCTT CTGTTTGGCC TTAGGTATCG CGCTTGGGGC AAGTATGGCC TACGTGCTGG TGTTGATTTT GTTCGTGGCA CCATTTTTGT GGTGGCAGAA GACGCATATC AGTCGCAAAC AGAGCTTAGC GGTAAATAAA GCGTCTTAG
|
Protein sequence | MNSHSGTIGR WQGAGLMATT LLGTGVFILP QMTIDKAQAG ALIAWSLLTL AIIPVALIFG RLASVFPHAA GPAYFVEKAF GRTAGRTIGL IFLLVVPMGA PAAILMTFQF VNALIPLDGW SKVGAEVLVI FGLFLLNLRG IQVSAKLQFG LTLCIVAIVV LLFGASSVQP GHLTSLASYG TPEIPTIMIA AGIAFWSFLG IEAMTHLADD FRRPQQDMIP AMMMGTVLVG IIYVACTLIL LLVPTDKSVA MIGVFDTLLG GYGAQVIGVL GIASGLATVN VYAASAARLI WSFSNEGILP RCFAVKNRHG VPIRALAALL GVMASVIVLT HTTGQELEHL IAWSNGVFVV IYLMAMLAAA KLLPRSNLPL VVLGCGFCLA LGIALGASMA YVLVLILFVA PFLWWQKTHI SRKQSLAVNK AS
|
| |