Gene Shewmr7_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3833 
Symbol 
ID4256820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4553718 
End bp4554986 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content52% 
IMG OID638124522 
Productinner membrane protein YjeH 
Protein accessionYP_739867 
Protein GI114049317 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAC ATAGCGGAAC TATAGGACGT TGGCAAGGCG CAGGCTTGAT GGCCACCACT 
TTGCTGGGCA CAGGGGTGTT TATTCTCCCG CAAATGACAA TCGACAAGGC CCAGGCTGGC
GCGCTTATCG CATGGTCACT CCTAACCTTA GCCATTATTC CGGTGGCACT GATTTTTGGT
CGATTGGCGA GTGTCTTTCC CCATGCTGCG GGTCCCGCTT ATTTTGTCGA AAAGGCTTTT
GGTCGCACCG CTGGCCGTAC TATTGGGCTG ATTTTTTTAC TGGTGGTGCC CATGGGTGCG
CCAGCCGCGA TTTTGATGAC CTTCCAATTT GTTAATGCAC TCATTCCCCT CGATGGCTGG
TCTAAGGTTG GCGCTGAGGT ATTAGTGATA TTCGGCTTAT TTCTGCTCAA TCTACGTGGC
ATTCAAGTCT CGGCCAAACT GCAATTTGGC TTAACCCTTT GTATTGTGGC TATTGTGGTG
CTGTTATTCG GGGCGAGTAG TGTGCAACCT GGGCACTTAA CCTCATTAGC GAGCTATGGC
ACGCCAGAAA TCCCCACCAT TATGATTGCC GCAGGTATCG CCTTTTGGAG TTTCCTTGGG
ATTGAGGCCA TGACTCACCT CGCCGATGAT TTTCGCCGTC CGCAGCAGGA TATGATCCCA
GCGATGATGA TGGGCACTGT GCTGGTGGGC ATTATTTATG TGGCCTGTAC CTTGATTTTA
CTGTTAGTAC CGACCGATAA AAGCGTGGCC ATGATTGGCG TGTTCGATAC GCTCTTGGGC
GGCTATGGCG CACAAGTGAT TGGTGTGCTG GGGATTGCCA GCGGTCTTGC CACGGTCAAC
GTGTATGCCG CCAGTGCCGC GCGCCTTATC TGGAGCTTTA GTAACGAAGG TATTTTGCCG
CGCTGCTTTG CAGTAAAAAA TCGTCACGGT GTGCCAATCC GCGCCTTGGC GGCGTTACTC
GGCGTGATGG CGAGTGTAAT AGTGCTGACC CACACCACGG GCCAAGAGCT CGAACATTTG
ATTGCCTGGA GTAATGGGGT GTTCGTGGTG ATCTACTTAA TGGCGATGTT AGCCGCGGCT
AAGCTATTGC CCCGCAGCAA CTTACCCTTA GTGGTATTAG GTTGTGGCTT CTGTTTGGCC
TTAGGTATCG CGCTTGGGGC AAGTATGGCC TACGTGCTGG TGTTGATTTT GTTCGTGGCA
CCATTTTTGT GGTGGCAGAA GACGCATATC AGTCGCAAAC AGAGCTTAGC GGTAAATAAA
GCGTCTTAG
 
Protein sequence
MNSHSGTIGR WQGAGLMATT LLGTGVFILP QMTIDKAQAG ALIAWSLLTL AIIPVALIFG 
RLASVFPHAA GPAYFVEKAF GRTAGRTIGL IFLLVVPMGA PAAILMTFQF VNALIPLDGW
SKVGAEVLVI FGLFLLNLRG IQVSAKLQFG LTLCIVAIVV LLFGASSVQP GHLTSLASYG
TPEIPTIMIA AGIAFWSFLG IEAMTHLADD FRRPQQDMIP AMMMGTVLVG IIYVACTLIL
LLVPTDKSVA MIGVFDTLLG GYGAQVIGVL GIASGLATVN VYAASAARLI WSFSNEGILP
RCFAVKNRHG VPIRALAALL GVMASVIVLT HTTGQELEHL IAWSNGVFVV IYLMAMLAAA
KLLPRSNLPL VVLGCGFCLA LGIALGASMA YVLVLILFVA PFLWWQKTHI SRKQSLAVNK
AS