Gene Shewmr7_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3831 
Symbol 
ID4256818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4551914 
End bp4552738 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content51% 
IMG OID638124520 
Productputative signal transduction protein 
Protein accessionYP_739865 
Protein GI114049315 
COG category[T] Signal transduction mechanisms 
COG ID[COG1639] Predicted signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTCTG CTGCGCTACT GAGTCGAGTC GATGACTTAC CCCGTTTACC TAAAGCCATC 
AGTGAGCTGC TTGAAGTAGT TAACGATGAT AATGCCACAG TCAAGAATAT TGCGACTAAG
GTGTCCCACG ATCCCTTGAT CAGCGCTAAG GTGCTGAGAC TGGCCAACTG CGCCCATTAC
GGCCACAGTC GCGAAGTGGG TAGCATTGAC GAAGCCGTAG TGCGCCTTGG CATGCAAACG
CTGCGGACGT TAGTTTTGGC TTCGGCGGTG ATGGGCTCTG TGCCTAAATG CCAAGGAGTC
GATTTAGCGC AGTTTTGGGG GCAAACCTTT GAAATTGCGC TTTATTGCCA AGAGATGGCC
AAACGTTGTG GAGTGCAGCC GGATGAAGCT TTTACCTGCG GTATTCTCCA TCGGATTGGT
GACTTACTGA TTGCGGCGAT TTCCCCCGAA GATGCTGAAA AGATTACCGA AGCTGTCGCT
CAGGGTAAAG ATAAGCATAC GTTTGAGCGC GAGCTGCTCG GCTATGATTC GCCCGATATT
GGCGCCTTGT TGGCCCAAAA CTGGAAATTC ACCCCCGCGC TGGTGCAGGG GATTCTTTAT
CAGGATCACC CCAAGGATTC GAATCCGTTT TCTAAATTGG CCGCCTTGTT GTGCCTCGCC
TATAAAGTGC TGGAGGAGTG GGACAGCATA GATGATGACG ATAAAACCAG TTGGTTATCG
CAATTAGCGA CCAAGAAGGG CTTAAAGATG GAAATGGGGG GATTGCGAGT CAAATTAACA
GAACTGAGAG GCGCTGGATT CGAAATAGGT AAGGCCCTTG CTTAA
 
Protein sequence
MDSAALLSRV DDLPRLPKAI SELLEVVNDD NATVKNIATK VSHDPLISAK VLRLANCAHY 
GHSREVGSID EAVVRLGMQT LRTLVLASAV MGSVPKCQGV DLAQFWGQTF EIALYCQEMA
KRCGVQPDEA FTCGILHRIG DLLIAAISPE DAEKITEAVA QGKDKHTFER ELLGYDSPDI
GALLAQNWKF TPALVQGILY QDHPKDSNPF SKLAALLCLA YKVLEEWDSI DDDDKTSWLS
QLATKKGLKM EMGGLRVKLT ELRGAGFEIG KALA