Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3824 |
Symbol | |
ID | 4256811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4544407 |
End bp | 4545366 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124513 |
Product | LysR family transcriptional regulator |
Protein accession | YP_739858 |
Protein GI | 114049308 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTCG ACAACTTAGC CAGAATCGAT CTCAACCTAC TGGTGATATT GAAGGTTTTG CTCGAAGAGC AGAGCGTCAC CCGCGCAGCG AGTCGATTAC ATATTAGCCA GTCGGCATTG AGCAAGAGCT TGAATCGCCT GCGAGAAACT CTAGATGATC CCCTGTTCCA GCGCACTGCC CACGGGCTTA AACCCACGGC CCATGCACTC AATATCGGGC AGAAATTGCC GAATATTTTG CAGGACTTAT ATCAACTCAC TCAACCACCG ACGTTTACGC CGGCCAGCAG TAACAGGCAG TTTTCCTTTG CCATGGTTGA AAGCGCCTAC GAAACCTTAA TTCCATATTT TATCGGCCCA TTGTTAAGCA CTGCACCGAA TCTGAAGCTC GACTCCTATG TGTGGACCGA GAAATCGATG CACGATTTAC AGCAAGGGCA AATTGACTTT GGGATCTCGG GGCGGGATCT ACACCCACTG TCAGACTCGC AAACGGACAG GCTCCCAGAT GGCATCAGCT GCCAAACCCT GTTTACCGAC CGGCAAGTAT GCTTGGTGCG CCAAGATCAT CCTTTGATGA CCGCACTCAC CTCGCCCCAA TGGGATTTAT CCCTGTACTT GGATATGGCG CATGTGCAGG TTCGCTGTGA AGGGAGTGAT TGGTGGGCGC TGGATTACTT TCTGGCCGAC CTTGGCCACA GGCGCAAAAT CAGCACAACT GTGCCCGATT TTTATGGCGC GGCCAGCATC TGTGCACACA GTGATTTAAT TTTCACTTTG CCTTCGAGCT TTGCCCTGCA CGCATGCAAG CTGTATCCAC TAAGGCTATT GCCTCTGCCC TTTGAATTTA TCCCTATGGC CTATGTGCTG CTCTGGCATC AGCGCAACGA TGAAGACCAA GGCCATAAAT GGATGCGTGA TACCATCTGC CAAAGTGTTG AAAAGCTTAT GCAACCCTAG
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Protein sequence | MNLDNLARID LNLLVILKVL LEEQSVTRAA SRLHISQSAL SKSLNRLRET LDDPLFQRTA HGLKPTAHAL NIGQKLPNIL QDLYQLTQPP TFTPASSNRQ FSFAMVESAY ETLIPYFIGP LLSTAPNLKL DSYVWTEKSM HDLQQGQIDF GISGRDLHPL SDSQTDRLPD GISCQTLFTD RQVCLVRQDH PLMTALTSPQ WDLSLYLDMA HVQVRCEGSD WWALDYFLAD LGHRRKISTT VPDFYGAASI CAHSDLIFTL PSSFALHACK LYPLRLLPLP FEFIPMAYVL LWHQRNDEDQ GHKWMRDTIC QSVEKLMQP
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