Gene Shewmr7_3822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3822 
Symbol 
ID4256809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4542355 
End bp4542921 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content50% 
IMG OID638124511 
ProductDTW domain-containing protein 
Protein accessionYP_739856 
Protein GI114049306 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGT GCCTCTGTGC CCATGTGCAG CCGATACAGC CGCAAACGCA GCTAGTGATA 
TTGCAGCATC CCTCGGAAGT CGAGCATAAA AAGAATAGCG TCAAGGTGTT AAGTCTAGTT
ATCCCCAACA CCCAAGTGTA TGTGGGGGAG ACTGAGGCGG ATTTTGCATT ATTGCGAGAG
CAGTTGATTG GCGGCGGGCG CCCTATCTAT CTTGTGTATC CCTCAGAACT GAGTGTAAGT
GTTGAAAGCC AGACGATTCC TGCCAATTCT GTGCTGTTAT TGATCGATGG CACCTGGCGC
AAAGCCTTTA AAATCTTGCA ACTCAATCCA TGGTTAGCTC AATTGCCGGC GGTGCACTTG
GCCGAAGGTT ATGCATCAAG ATACAAGATC CGTAAATCGA GTCGCAGTGA CAGTTTATCA
ACCTTAGAAG CGAGTGCTTA TATGCTAAAG GCGCTCGAGC CAGATTTAGA TGTGTCGCCT
CTATTGAATG CCTTCGATGC TATGGTGGAG ATGCGCATCC GGGCGATGCC AGCTCAAGTA
AGACTGCGTT ATCAGGGCGC GGGGTAA
 
Protein sequence
MNACLCAHVQ PIQPQTQLVI LQHPSEVEHK KNSVKVLSLV IPNTQVYVGE TEADFALLRE 
QLIGGGRPIY LVYPSELSVS VESQTIPANS VLLLIDGTWR KAFKILQLNP WLAQLPAVHL
AEGYASRYKI RKSSRSDSLS TLEASAYMLK ALEPDLDVSP LLNAFDAMVE MRIRAMPAQV
RLRYQGAG