Gene Shewmr7_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3816 
Symbol 
ID4256803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4534669 
End bp4536066 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content53% 
IMG OID638124505 
Productcarboxypeptidase 
Protein accessionYP_739850 
Protein GI114049300 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAC TCTCGGTATC GCGCGCGTTA TCAACATCCT CTTTAGCAAC ATCCTGTGCA 
CCTAATTCCC GTTCACTCGG TGTGAGTCCA TCCAAACTGA CCAAGAGTTT ACTCGCTTCC
ATCGTCACCT TGAGCTTAAT GGGTGCAGGG GGAAGCGCTG CCTATGCGGC GCAGCCCGAT
GCGGCTAAGT TGGCGGCGGG TGTGGAGCAA AAGGTGATCG ACTGGCGCCG TGATTTGCAC
CAACATCCTG AGTTATCTAA CCGTGAGTTT CGCACTAGCA AGATTATCGA AAAGCATCTG
AAATCCCTCG GATTAGAAGT GCAAACGGGC ATTGCCCATA CTGGCGTTGT AGGCATCTTA
AAGGGCGGTA AACCCGGTCC CTTGATTGCG ATCCGCGCCG ATATGGATGC TTTGCCCGTG
AGCGAAGTAG TCGATGTGCC TTTTGCCTCT AAAGCGACAG ATACCTATCG CGGTCAAACC
GTTGGGGTGA TGCATGCCTG CGGCCATGAT ACCCATGTGG CTATGTTGAT GGGTGTGGCC
GAGAATTTAG TGAAAGTGAA AGATAGCCTT GCCGGTGATG TGATGTTTAT CTTCCAACCC
GCCGAAGAAG GTGCGCCTGA TGGCGAAGAG GGCGGCGCGG AATTAATGCT AAAACAAGGG
CTGTTTGCCA AGCGCAAACC CGACCAAGTG TTTGGCATGC ATGTAACTTC GAGTATGCCA
AGCGGCATGA TTGGGGTGCG TAGCGGCCCT GCCATGGCGA GTGAAGATTC CTTCACAATC
AAAGTGAAAG GTCGTCAAAC CCATGGTTCT CGCCCCTGGA ATGGCGTCGA CCCTATCGTC
GCCGCGGCGC AAATTATTAC CAATGTGCAA ACCATTGTCA GTCGTCAGGT GGATATTACC
AAAGCGCCCG CCGTGGTGAG TTTTGGCGCA GTAAATGGCG GCATTCGCTC GAATATTATT
CCCGATGAAG TGGAGCTGAT TGGCACCATC CGCACCTTTG ACCAACCTAT GCGTGCCGAT
ATTAAGGTGC GCTTGGCCGA AATCGCCGAG TTATCGGCAA AAACCTTAGG TGCCACCGCG
ACAACCGAAA TCCATCAAGG TTATCCCGTG GTGGTGAATA ATCCCGAATT AGTCGCCAGT
ATGCGCCCAG TGCTTGCCAG TGTGGTCGGC GATAAGATGC TGATTGAGCC CGGATTAATC
ACTGGTGCCG AGGACTTTTC CTTCTATGCC CTAGAGTCTC CTGGGATGTT TTTCTTCCTC
GGGGTAACGC CAAAAGGCAC AGATCCTGAA ACGGCGGCCA GTAACCATTC TCCCGCCTTC
TATGTGGATG AAAGTGCACT CAAAGTCGGG GTAGAAGCCA TGACCAAGGT TGCTCTTACG
GCACTTAAGG CGCAATAA
 
Protein sequence
MTVLSVSRAL STSSLATSCA PNSRSLGVSP SKLTKSLLAS IVTLSLMGAG GSAAYAAQPD 
AAKLAAGVEQ KVIDWRRDLH QHPELSNREF RTSKIIEKHL KSLGLEVQTG IAHTGVVGIL
KGGKPGPLIA IRADMDALPV SEVVDVPFAS KATDTYRGQT VGVMHACGHD THVAMLMGVA
ENLVKVKDSL AGDVMFIFQP AEEGAPDGEE GGAELMLKQG LFAKRKPDQV FGMHVTSSMP
SGMIGVRSGP AMASEDSFTI KVKGRQTHGS RPWNGVDPIV AAAQIITNVQ TIVSRQVDIT
KAPAVVSFGA VNGGIRSNII PDEVELIGTI RTFDQPMRAD IKVRLAEIAE LSAKTLGATA
TTEIHQGYPV VVNNPELVAS MRPVLASVVG DKMLIEPGLI TGAEDFSFYA LESPGMFFFL
GVTPKGTDPE TAASNHSPAF YVDESALKVG VEAMTKVALT ALKAQ