| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3807 |
|---|
| Symbol | |
|---|
| ID | 4255390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4525221 |
|---|
| End bp | 4525685 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638124497 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_739842 |
|---|
| Protein GI | 114049292 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.509614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.994657 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCATA TCGCACTCTA TGAGCCAGAA ATCGCACCCA ACACGGGTAA TATCATTCGC
CTTTGCGCAA ACAACGGCAG CCAACTGCAT CTAATTGAGC CACTTGGCTT TGATTTTGAA
GAGAAAAAAC TGCGCCGAGC GGGCCTAGAT TATGCCGATT TAACCAATGT GACTCGCCAT
AAAAACTTCG ATGCCTTCCT CGAAGCCATG ACAGGCAAAC GCATTATGGC CTGTACCACT
AAGGGCAGCC GCCCACACAC TGAACTCAGT TTTGCCAAGG ATGACGTGCT ATTATTTGGC
CCAGAAACCC GTGGTCTACC TATGCCAATT ATCGAGTCGA TCCCAACCGA GCAGCGATTA
CGCATTCCGA TGGCGGCGAC CAGTCGCAGC CTCAACCTCT CCAATGCCGT GGCGATTATC
AGCTACGAAG CCTGGCGTCA GCTCGGGTTT GAAGGCGCAA TTTAA
|
|---|
| Protein sequence | MFHIALYEPE IAPNTGNIIR LCANNGSQLH LIEPLGFDFE EKKLRRAGLD YADLTNVTRH
KNFDAFLEAM TGKRIMACTT KGSRPHTELS FAKDDVLLFG PETRGLPMPI IESIPTEQRL
RIPMAATSRS LNLSNAVAII SYEAWRQLGF EGAI
|
|---|
| |