Gene Shewmr7_3793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3793 
Symbol 
ID4255377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4507307 
End bp4508335 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content49% 
IMG OID638124484 
Productformate dehydrogenase gamma subunit 
Protein accessionYP_739829 
Protein GI114049279 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID[TIGR01583] formate dehydrogenase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAACA AACAGTTAAA CAAATCACTG CGCAGTCTGT TTGCTCTGAT GGTACTCGTG 
ATGGGATTGG GCCTAGGTTC AGTAATGAGC GCAAGCCCAG TACAGGCAAG TGATCAGCAA
TCGAGTCAAC AACAGGCGAA AGCGCAAACC AGCGAAGCCG ATCTGTGGCG CGCGGTAAAG
TCGGGTGAAA CTGGCTATAC CACAGCCAAA GGGGTCGAAA CTGGGGTGTT GATTAACGTT
GCCGGTAACC AAGGTAAAGA ACTGAGAAAC CAATACATCA CCCCGATTAT GGCCTTGGCT
GTAACGGGTG TGTTTGGTGC TTTCTTACTG TTTTACCTGG TGAATGGTCC TTCAAGACTC
AGCCACGGCT TTTCAGGCAA GATGGTAGCA CGTTGGTCTA AGGCGGATCT GTGGATCCAC
TGGATCATGG CAATTAGCTG TCTCACGCTG ATGTTTACCG GCTTAACCAT TATGCTCGGT
AAGCATGTTG TGCAAGAACT GCTAGGGCCG GACATCTGGG CACCGCTGAT CTACGGCAGT
AAAACCGTGC ACGACTGGGC AGGCCCCATC TTTATCATGG CGTGGATTGT CTGCGTGGTG
AAATGGATGC CGCTACAAAC CTTTAAAATG TACGATCTTA AATGGTTCCT AGTGGTCGGT
GGCTATATCA ACTTTGGTCC ATTCAAAGGT AAACACCCTG ACAGTGGTTT TGCTAACGCC
GGTGAAAAAA TGTGGTTCTG GACACTGACC CTATTCGGGC TGTTTATCAG TGTCTCTGGC
ATCATGTTGG TATTGCCCGG CTTAGACCTG CCCCGTGAAG CCTCGATGGG CGCGCTGCTG
ATCCACTCGA TCAGTGCCGT TATCCTGATT GCCTTTACCA TAGTGCATAT CTGGATGGCA
ACCGTACTCA GTGAAGGTGG TATGGAGTGT ATGAAGTCAG GCTATTGTGA TGAGAACTGG
GCTATCCAGC ACCACAATTT ATGGTATGAC GAAATCAAGG CCAACGGCAG TCTGCGTTAT
AAAGACTAA
 
Protein sequence
MLNKQLNKSL RSLFALMVLV MGLGLGSVMS ASPVQASDQQ SSQQQAKAQT SEADLWRAVK 
SGETGYTTAK GVETGVLINV AGNQGKELRN QYITPIMALA VTGVFGAFLL FYLVNGPSRL
SHGFSGKMVA RWSKADLWIH WIMAISCLTL MFTGLTIMLG KHVVQELLGP DIWAPLIYGS
KTVHDWAGPI FIMAWIVCVV KWMPLQTFKM YDLKWFLVVG GYINFGPFKG KHPDSGFANA
GEKMWFWTLT LFGLFISVSG IMLVLPGLDL PREASMGALL IHSISAVILI AFTIVHIWMA
TVLSEGGMEC MKSGYCDENW AIQHHNLWYD EIKANGSLRY KD