Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3793 |
Symbol | |
ID | 4255377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4507307 |
End bp | 4508335 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124484 |
Product | formate dehydrogenase gamma subunit |
Protein accession | YP_739829 |
Protein GI | 114049279 |
COG category | [C] Energy production and conversion |
COG ID | [COG2864] Cytochrome b subunit of formate dehydrogenase |
TIGRFAM ID | [TIGR01583] formate dehydrogenase, gamma subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAAACA AACAGTTAAA CAAATCACTG CGCAGTCTGT TTGCTCTGAT GGTACTCGTG ATGGGATTGG GCCTAGGTTC AGTAATGAGC GCAAGCCCAG TACAGGCAAG TGATCAGCAA TCGAGTCAAC AACAGGCGAA AGCGCAAACC AGCGAAGCCG ATCTGTGGCG CGCGGTAAAG TCGGGTGAAA CTGGCTATAC CACAGCCAAA GGGGTCGAAA CTGGGGTGTT GATTAACGTT GCCGGTAACC AAGGTAAAGA ACTGAGAAAC CAATACATCA CCCCGATTAT GGCCTTGGCT GTAACGGGTG TGTTTGGTGC TTTCTTACTG TTTTACCTGG TGAATGGTCC TTCAAGACTC AGCCACGGCT TTTCAGGCAA GATGGTAGCA CGTTGGTCTA AGGCGGATCT GTGGATCCAC TGGATCATGG CAATTAGCTG TCTCACGCTG ATGTTTACCG GCTTAACCAT TATGCTCGGT AAGCATGTTG TGCAAGAACT GCTAGGGCCG GACATCTGGG CACCGCTGAT CTACGGCAGT AAAACCGTGC ACGACTGGGC AGGCCCCATC TTTATCATGG CGTGGATTGT CTGCGTGGTG AAATGGATGC CGCTACAAAC CTTTAAAATG TACGATCTTA AATGGTTCCT AGTGGTCGGT GGCTATATCA ACTTTGGTCC ATTCAAAGGT AAACACCCTG ACAGTGGTTT TGCTAACGCC GGTGAAAAAA TGTGGTTCTG GACACTGACC CTATTCGGGC TGTTTATCAG TGTCTCTGGC ATCATGTTGG TATTGCCCGG CTTAGACCTG CCCCGTGAAG CCTCGATGGG CGCGCTGCTG ATCCACTCGA TCAGTGCCGT TATCCTGATT GCCTTTACCA TAGTGCATAT CTGGATGGCA ACCGTACTCA GTGAAGGTGG TATGGAGTGT ATGAAGTCAG GCTATTGTGA TGAGAACTGG GCTATCCAGC ACCACAATTT ATGGTATGAC GAAATCAAGG CCAACGGCAG TCTGCGTTAT AAAGACTAA
|
Protein sequence | MLNKQLNKSL RSLFALMVLV MGLGLGSVMS ASPVQASDQQ SSQQQAKAQT SEADLWRAVK SGETGYTTAK GVETGVLINV AGNQGKELRN QYITPIMALA VTGVFGAFLL FYLVNGPSRL SHGFSGKMVA RWSKADLWIH WIMAISCLTL MFTGLTIMLG KHVVQELLGP DIWAPLIYGS KTVHDWAGPI FIMAWIVCVV KWMPLQTFKM YDLKWFLVVG GYINFGPFKG KHPDSGFANA GEKMWFWTLT LFGLFISVSG IMLVLPGLDL PREASMGALL IHSISAVILI AFTIVHIWMA TVLSEGGMEC MKSGYCDENW AIQHHNLWYD EIKANGSLRY KD
|
| |