| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3791 |
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| Symbol | |
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| ID | 4255375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4503782 |
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| End bp | 4506634 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124482 |
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| Product | formate dehydrogenase alpha subunit |
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| Protein accession | YP_739827 |
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| Protein GI | 114049277 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTAA CCCGCAAAAC AGACCAAGTC GTCGAGCCTA AAGTGCCCGC CCTCGGTCTT
AATCGTCGCC AATTCTTAAA ATCTGCAGGT CTTGCCACTG GTGGTATCGC CGCCGCGTCT
ATGCTTGGCA CAGGTATGAT GCGTAAAGCA CAGGCGCAGG AACATATCCC CCATAATGCA
CCGACTGAAG TCAAACGTAC CATCTGCTCT CACTGCGCTG TGGGTTGTGG TATCTATGCT
GAAGTGCAAA ACGGTGTGTG GACAGGTCAA GAACCCGCGT TCGATCATCC ATTTAACCAA
GGCGGCCACT GCGCGAAAGG GGCTGCACTG CGTGAACACG GCCACGGTGA AAAACGCCTG
AAATACCCAA TGAAGTTAGA AGGCGGCAAG TGGAAGAAGA TCTCTTGGGA TCAAGCCATC
AATGAAGTGG GCGATAAAAT GACTGCGATT CGTCAAGAAT CGGGTCCAGA CTCTATCTAC
TTTATGGGTA GTGCTAAGTT CTCTAACGAA CAGGCTTATT TATATCGCAA ACTCGCGGCA
CTGTGGGGTA CAAACAACGT CGACCACTCT GCCCGTATTT GTCACTCTAC CACGGTAGCC
GGTGTTGCTA ACACTTGGGG CTACGGTGCG CAAACCAACT CGTTAAACGA TATCCGCAAC
TCTAAGTGCA TCATGTTCGT GGGTTCAAAC CCAAGTGAAG CACACCCTGT CGCCATGCAA
CACATTCTGG TGGCCAAAGA GCGCGGCGCT AAGATTATCG TTGTTGACCC ACGTTTCACC
CGTACAGCAG CTAAGTCTGA CGAGTACGTG CATATCCGCC CAGGTACCGA TATCCCCTTC
ATCTATGGCC TGTTATGGCA CATTTTTGAA AATGGCTGGG AAGATAAAGA GTTCATCAAG
CAACGTGTAT ACGGCATGGA ACGTATTCGC GATGAAGTGA AAAAATATAC CCCTGAAGAA
GTCGAAAACG TTGCTGGTGT GCCTAAGGCG CAAATGTATC GTATCGCAAA AATGTTAGCA
GAGACCAAAC CAGGCACTAT CGTATGGTGT ATGGGCGGTA CTCAGCACCA CGTCGGTAAC
GCCAACACCC GTTCATACTG TATTTTACAG TTAGCGCTGG GCAACATGGG CGTATCGGGC
GGTGGTACCA ACATTTTCCG CGGTCACGAT AACGTGCAAG GTGCAACGGA CTTTGGTCTG
TTATTCGACA ACTTACCCGG TTACTACGGT TTAACCTCTG GCGCTTGGGC TCACTGGTCT
GGCGTTTGGG ACTTAGATCC TAAATGGGTT GCAGGCCGTT TCGACCAAGG CGAATACTTA
GGTCAAACCC CACAAACCTC AACGGGTATA CCCTGCTCTC GCTGGCACGA TGGTGTACTC
GAAGATAAAA CCAAGATCGC GCAGAAGGAT AACATCCGTC TGGCGTTCTT CTGGGGTCAA
TCTGTCAACA CCGAAACCCG TGGCCGCGAA GTGCGTGAAG CACTGAACAA GTTAGATACT
GTAGTTGTTG TCGACCCAAT CCCAACCATG GCCGGTGTTA TGCACCAGCG TAAAGATGGG
GTGTATCTGC TCCCTGCGTC GACTCAATTT GAAACCTACG GCTCAGTGTC TGCCACTAAC
CGTTCGATTC AATGGCGCTC TAAAGTGATC GAGCCGCTGT TTGAGTCTCT GCCTGACCAC
GTCATTATGT ACAAACTGGC GAAAAAGCTG GGTATCGAAA AAGAATTCTG TAAGCACATC
CAAGTGAATG GTGAAGAGCC ATTGATTGAA GACGTGACCC GCGAATTCAA CAAAGGCATG
TGGACCGTCG GTTACACAGG CCAGAGCCCA GAACGTCTGA AAATGCACCA AGAAAACTGG
GGCACTTTCG ATGTTAACAG CCTGACCGCA CCGGGCGGCC CAGCTAAAGG TGAAGTCTAC
GGCTTACCTT GGCCATGTTG GGGTACTCCA GAGATGAAAC ACCCTGGTAC CCAAATCCTT
TACGATCAAT CCAAAGAAGT GAAAGACGGT GGTGGTAACT TCCGCGCCCG TTATGGTGTT
GAACACAATG GTGTGAATAT TCTCGCCGAC GGTTCATTCT CCAAAGGCAG TGAAATTCAA
GATGGTTATC CTGAGTTTAC CGCCGACATG CTCAAGCAAT TGGGTTGGTG GGATGATTTA
ACTGAAGAAG AGAAAAAATA CGCCGAAGGC AAAAACTGGA AAACAGATAT TTCTGGTGGT
ATCCAACGTG TTGCCATCAA ACACGGCTGT ATTCCTTTCG GTAACGCAAA AGCGCGTTGT
ATCGTGTGGA CTTTCCCAGA CGATATCCCG CTGCACCGCG AACCACTCTA CACTCCTCGT
CGTGACTTAG TCGCTAAGTA CCCAACCTAC GAAGACCGTA TGGTTGCCCG TCTACCGACC
CTGTATAAGT CAATTCAGGA TAAGGACTTC ACCCAAGGCT TCCCACTGAC ACTGACCTCT
GGTCGTTTAG TGGAATACGA AGGTGGTGGT GAAGAATCTC GTTCTAACCC TTGGTTGGCC
GAGCTACAAC AGGAAATGTT CATCGAAATG AACCCGGCAG ACGCTGCTGA CCGTGGTATC
CGTGACGGTG ACAATGTCTT TGTTCATGGT CCTGAAGGCG CCAAGATCAC AGTGAAGGCA
ATGGTGACAC CACGGGTTGT TCCGGGTGAA TGTTTTATGC CATACCACTT CGCCGGTATC
TTCGAAGGTG AAAACCTCGC GAAGAATTAC CCAGAAGGTA CAGTACCTTA TGTACAAGGT
GAATCGGCAA ACACCATTTT AACTTACGGC TATGACGTTG TGACTCAGAT GCAAGAAACT
AAGTCCAGCC TTTGCCAAGT TAGCAAAGCC TAA
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| Protein sequence | MRLTRKTDQV VEPKVPALGL NRRQFLKSAG LATGGIAAAS MLGTGMMRKA QAQEHIPHNA
PTEVKRTICS HCAVGCGIYA EVQNGVWTGQ EPAFDHPFNQ GGHCAKGAAL REHGHGEKRL
KYPMKLEGGK WKKISWDQAI NEVGDKMTAI RQESGPDSIY FMGSAKFSNE QAYLYRKLAA
LWGTNNVDHS ARICHSTTVA GVANTWGYGA QTNSLNDIRN SKCIMFVGSN PSEAHPVAMQ
HILVAKERGA KIIVVDPRFT RTAAKSDEYV HIRPGTDIPF IYGLLWHIFE NGWEDKEFIK
QRVYGMERIR DEVKKYTPEE VENVAGVPKA QMYRIAKMLA ETKPGTIVWC MGGTQHHVGN
ANTRSYCILQ LALGNMGVSG GGTNIFRGHD NVQGATDFGL LFDNLPGYYG LTSGAWAHWS
GVWDLDPKWV AGRFDQGEYL GQTPQTSTGI PCSRWHDGVL EDKTKIAQKD NIRLAFFWGQ
SVNTETRGRE VREALNKLDT VVVVDPIPTM AGVMHQRKDG VYLLPASTQF ETYGSVSATN
RSIQWRSKVI EPLFESLPDH VIMYKLAKKL GIEKEFCKHI QVNGEEPLIE DVTREFNKGM
WTVGYTGQSP ERLKMHQENW GTFDVNSLTA PGGPAKGEVY GLPWPCWGTP EMKHPGTQIL
YDQSKEVKDG GGNFRARYGV EHNGVNILAD GSFSKGSEIQ DGYPEFTADM LKQLGWWDDL
TEEEKKYAEG KNWKTDISGG IQRVAIKHGC IPFGNAKARC IVWTFPDDIP LHREPLYTPR
RDLVAKYPTY EDRMVARLPT LYKSIQDKDF TQGFPLTLTS GRLVEYEGGG EESRSNPWLA
ELQQEMFIEM NPADAADRGI RDGDNVFVHG PEGAKITVKA MVTPRVVPGE CFMPYHFAGI
FEGENLAKNY PEGTVPYVQG ESANTILTYG YDVVTQMQET KSSLCQVSKA
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