Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3789 |
Symbol | |
ID | 4255373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4502723 |
End bp | 4503400 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124480 |
Product | cytoplasmic chaperone TorD family protein |
Protein accession | YP_739825 |
Protein GI | 114049275 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAT CAGTAAGACA AGTATCAGAA AACGATCAGT TGAGAGCCGA TATCTATCAA CTGTTGGCCG CCCTGTTGCG TCGCCATCCA AGCCCTGAAC TACTGCAATT TTTGGCCAAT CTTGAAATCG ATGCCAATGA AGACAATCAG ATGACCAAGG CTTGGTTATC CCTGCAATTA GCGGCGCAGC AGTTCAGCAG TGAACAATTA GAAGATGAGT ATTTTGCCCT GTTCCTCGGT GTGGGTTGTG GCGAAATCCT GCCCTATGGC AGCTGGTTTA TGACAGGCTC ACTGATGGAT AAGCCCTTGG CTCTGCTGCG CCAAGACTTA ATGCAACTCG GTTTTGAACG TGAAGAAAAC GTCAAAGAAC CCGAGGATCA TGTGGCCGCC CTGTGCGAAG TCATGGGTAC GCTTATTCTT GAAGCTCCAG GCTACCGTCA GCTGGCGTTT TATCAACGCC ACATGGGCAG CTGGATTCAG CGCTTCTGCG ACGCCGTCAG CAAAGCCCCG AGCGCTGCGT TTTATGCCAC GGTTGCCCAT CTTGCTAAAG CGTTTTTTGA GATGGAAGCC GCCGAGTTTG AACAGCTCAG TTTAGATATA CCCGTTAATT GCCCTGGCAG TGCCGAGTTA CAACCTGCGG CTAGCGATTT AGAAAAACAA GTGGAATTAA TGAACTAA
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Protein sequence | MTESVRQVSE NDQLRADIYQ LLAALLRRHP SPELLQFLAN LEIDANEDNQ MTKAWLSLQL AAQQFSSEQL EDEYFALFLG VGCGEILPYG SWFMTGSLMD KPLALLRQDL MQLGFEREEN VKEPEDHVAA LCEVMGTLIL EAPGYRQLAF YQRHMGSWIQ RFCDAVSKAP SAAFYATVAH LAKAFFEMEA AEFEQLSLDI PVNCPGSAEL QPAASDLEKQ VELMN
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