Gene Shewmr7_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3784 
Symbol 
ID4255368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4497589 
End bp4498494 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID638124475 
ProductDNA binding domain-containing protein 
Protein accessionYP_739820 
Protein GI114049270 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1910] Periplasmic molybdate-binding protein/domain 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000134193 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.867769 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG CCAGTGAATT GATTTACATG AGCGCGAAAC AGGTTGCTGA GTATTTAGAT 
CTGAACGAGA AGAAGGTCTA CGCCATGGCG AATGACCGAA TTCTGCCTGC AACGAAAATC
ACCGGTAAAT GGTTATTCCC TAAGGTGCTA ATTGATCGCT GGGTGATGGA CTCCTGCCAC
AGCGGCATGT TAACCGACCG ACTCTTGATC ACTGGCAGTG ATGATCCCCT GCTTTCTATG
TTAGTGGCGC GTTTGATGGC ACAGGTTGGG AGTCGTGAGC TGATCAGCTA CAGCGCAACA
GGCTCGCGCC TTGGGTTAGA GCTTTTAGCA AAGGGTTATG CTGATGTTTG TACTCTGCAC
TGGGGCAGCA TGGAGGATAG AAATATCCGC CATCCAGCCT TACTCAAAGG GTATCAGAAC
CATCAGCAAT GGATCATGAT CCATGGCTAT TCCCGCCAGC AAGGTTTGAT CATGCGAACC
GATATGCACC ACAGATGCCA AGAAGAGGAC AAGGTACTCA CCTTACCCTG GCGCTGGGTC
AGTCGCCAAG GTGGCGCAGG GAGCCAACAA CATTTAGAAC AATGGCTATT AAAGCAAGGG
GCACGTTTAG ATCAACTCAA TGTTGTGCTA ACAGCCTACA GCGAGCGTGA ACTTGCAGGA
TATATAGCAC GGGGTGATGC CGACATTGGT TTCGGTTGCC AATCCGTAGC CTTAGAAAGT
GGTTTAAGCT TCGTGCCACT CGTCAAAGAG TCCTTCGACT TTGTTATGCC GCAAAGCATT
TACTTCCGCA GACAACTGCA ACAACTCTTT ACTATGTTAA GCAGCGGGCA TACACGCCAA
ATGGCGGCGT TGTTAGGCGG ATACGATCTT ACCGATTGCG GCCAGTTATT GTGGAGTGCT
AACTAA
 
Protein sequence
MTSASELIYM SAKQVAEYLD LNEKKVYAMA NDRILPATKI TGKWLFPKVL IDRWVMDSCH 
SGMLTDRLLI TGSDDPLLSM LVARLMAQVG SRELISYSAT GSRLGLELLA KGYADVCTLH
WGSMEDRNIR HPALLKGYQN HQQWIMIHGY SRQQGLIMRT DMHHRCQEED KVLTLPWRWV
SRQGGAGSQQ HLEQWLLKQG ARLDQLNVVL TAYSERELAG YIARGDADIG FGCQSVALES
GLSFVPLVKE SFDFVMPQSI YFRRQLQQLF TMLSSGHTRQ MAALLGGYDL TDCGQLLWSA
N