Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3782 |
Symbol | |
ID | 4255366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4489618 |
End bp | 4490934 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124469 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_739818 |
Protein GI | 114049268 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATTCAC TCAAAGCCTA TCTCACCCGC AATCTGCTTA TCACCCTCAC CTGCGCCATG GCGCTATTGT TGTATTTGCT ATTTCAAGGC ATTCAAATCT TGACCCAAGA CTTTGTCGCC TCGCGCCTAC AACACGATGC CGATAGTCTG ATCTCCGCCC TCGAACCGCA AGCGGATGGC ACTTGGTCAC TGAGTACCGA CAGGCTCCCC ACTGTGTATC ACAGGGTCAA TTCGGGCCAC TACTTTGCGA TTAAAATCGG TGAGCAGCAG CTCCGCTCTC GATCGCTTTT CGATCATAAC GTCGTCCTGC CAACACTAAA AGTTGGTGAA CAACAACTCG CCACTCAATA TGTTGGCCAC CATCATTGGC TGATGCTCAG TCAGGCAATC GTTAAGAATG GGCAAACCAT TATCCTCTGG GTGACGGAAG ACATTAGCTC ACTCGAGCAA ACCCAATTAC GCTTTTTAGG CTTTGCCGCG GTAGTGGTAC TGCTGACCAT TATGATCCTG TTATTTGCCC AGCACCTGTT GCTCAAGCGG GGCTTTAAAT CGCTAGAGCA AATGCCAGAT GCAATCAGGC AACTGCGGCT CCAAGGTCAA GAAATCGATA CCCAGCGCAC GCCAACAGAG ATTAGCCCTT TGATTGAGGA AATCGAACGC CTCATGAATC AACTCGGGCA GAGGGTGCAA CGTTCACGCA ATGCCTTGGG TAATCTTGCC CACGAAATGA AACGCCCACT GCAAGGGCTA CAATCCTACC TCGATAGCCT AGCGCCAGAG CAAAGACGCG AAGGCAGTAA GGTGCTCGCG GATCTGCACC ATATTATTGA GCGAGAGCTT AAGCGCACTA AAATCGTCGG GCTTTCAACG CCTGGGCGTT TTACCGTGCT CAATGACGAT CTGCCGCCAC TCATCCAAGT GATGCAGCGC ATCTATCCAG AGAGTCAAAT TGATTACCAG TTTGATAAAA CTCTGGTCAT GCCCTTCGAC CGGGACGACT TACTGGAACT GCTAGGCAAT CTACTCGACA ACGCCTGCAA ACATGCGCGT CAACAGATAA AGCTTTGTAT TGAGCAGACT CATGCGAGCA AGCGGGCGTA TCAGATTGAG GTCAGCGACG ATGGCGAAGG TGTATCCGAT AGCGATTTAG CTGTGATTAC GGAGCGAGGG ATTCGGCTCG ATGAGAGCAT TCAAGGCCAT GGCTTAGGCC TGTCGATTTG CAAAGATATT GTCGAGAGTT ATCAAGGGGA ACTTAGCTTT ACACATTCAG AGCTTGGCGG ACTAAAGGTT AGCGTGCTAT TACCTCAGCC GCATTAA
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Protein sequence | MYSLKAYLTR NLLITLTCAM ALLLYLLFQG IQILTQDFVA SRLQHDADSL ISALEPQADG TWSLSTDRLP TVYHRVNSGH YFAIKIGEQQ LRSRSLFDHN VVLPTLKVGE QQLATQYVGH HHWLMLSQAI VKNGQTIILW VTEDISSLEQ TQLRFLGFAA VVVLLTIMIL LFAQHLLLKR GFKSLEQMPD AIRQLRLQGQ EIDTQRTPTE ISPLIEEIER LMNQLGQRVQ RSRNALGNLA HEMKRPLQGL QSYLDSLAPE QRREGSKVLA DLHHIIEREL KRTKIVGLST PGRFTVLNDD LPPLIQVMQR IYPESQIDYQ FDKTLVMPFD RDDLLELLGN LLDNACKHAR QQIKLCIEQT HASKRAYQIE VSDDGEGVSD SDLAVITERG IRLDESIQGH GLGLSICKDI VESYQGELSF THSELGGLKV SVLLPQPH
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