Gene Shewmr7_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3782 
Symbol 
ID4255366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4489618 
End bp4490934 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content50% 
IMG OID638124469 
Productperiplasmic sensor signal transduction histidine kinase 
Protein accessionYP_739818 
Protein GI114049268 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTATTCAC TCAAAGCCTA TCTCACCCGC AATCTGCTTA TCACCCTCAC CTGCGCCATG 
GCGCTATTGT TGTATTTGCT ATTTCAAGGC ATTCAAATCT TGACCCAAGA CTTTGTCGCC
TCGCGCCTAC AACACGATGC CGATAGTCTG ATCTCCGCCC TCGAACCGCA AGCGGATGGC
ACTTGGTCAC TGAGTACCGA CAGGCTCCCC ACTGTGTATC ACAGGGTCAA TTCGGGCCAC
TACTTTGCGA TTAAAATCGG TGAGCAGCAG CTCCGCTCTC GATCGCTTTT CGATCATAAC
GTCGTCCTGC CAACACTAAA AGTTGGTGAA CAACAACTCG CCACTCAATA TGTTGGCCAC
CATCATTGGC TGATGCTCAG TCAGGCAATC GTTAAGAATG GGCAAACCAT TATCCTCTGG
GTGACGGAAG ACATTAGCTC ACTCGAGCAA ACCCAATTAC GCTTTTTAGG CTTTGCCGCG
GTAGTGGTAC TGCTGACCAT TATGATCCTG TTATTTGCCC AGCACCTGTT GCTCAAGCGG
GGCTTTAAAT CGCTAGAGCA AATGCCAGAT GCAATCAGGC AACTGCGGCT CCAAGGTCAA
GAAATCGATA CCCAGCGCAC GCCAACAGAG ATTAGCCCTT TGATTGAGGA AATCGAACGC
CTCATGAATC AACTCGGGCA GAGGGTGCAA CGTTCACGCA ATGCCTTGGG TAATCTTGCC
CACGAAATGA AACGCCCACT GCAAGGGCTA CAATCCTACC TCGATAGCCT AGCGCCAGAG
CAAAGACGCG AAGGCAGTAA GGTGCTCGCG GATCTGCACC ATATTATTGA GCGAGAGCTT
AAGCGCACTA AAATCGTCGG GCTTTCAACG CCTGGGCGTT TTACCGTGCT CAATGACGAT
CTGCCGCCAC TCATCCAAGT GATGCAGCGC ATCTATCCAG AGAGTCAAAT TGATTACCAG
TTTGATAAAA CTCTGGTCAT GCCCTTCGAC CGGGACGACT TACTGGAACT GCTAGGCAAT
CTACTCGACA ACGCCTGCAA ACATGCGCGT CAACAGATAA AGCTTTGTAT TGAGCAGACT
CATGCGAGCA AGCGGGCGTA TCAGATTGAG GTCAGCGACG ATGGCGAAGG TGTATCCGAT
AGCGATTTAG CTGTGATTAC GGAGCGAGGG ATTCGGCTCG ATGAGAGCAT TCAAGGCCAT
GGCTTAGGCC TGTCGATTTG CAAAGATATT GTCGAGAGTT ATCAAGGGGA ACTTAGCTTT
ACACATTCAG AGCTTGGCGG ACTAAAGGTT AGCGTGCTAT TACCTCAGCC GCATTAA
 
Protein sequence
MYSLKAYLTR NLLITLTCAM ALLLYLLFQG IQILTQDFVA SRLQHDADSL ISALEPQADG 
TWSLSTDRLP TVYHRVNSGH YFAIKIGEQQ LRSRSLFDHN VVLPTLKVGE QQLATQYVGH
HHWLMLSQAI VKNGQTIILW VTEDISSLEQ TQLRFLGFAA VVVLLTIMIL LFAQHLLLKR
GFKSLEQMPD AIRQLRLQGQ EIDTQRTPTE ISPLIEEIER LMNQLGQRVQ RSRNALGNLA
HEMKRPLQGL QSYLDSLAPE QRREGSKVLA DLHHIIEREL KRTKIVGLST PGRFTVLNDD
LPPLIQVMQR IYPESQIDYQ FDKTLVMPFD RDDLLELLGN LLDNACKHAR QQIKLCIEQT
HASKRAYQIE VSDDGEGVSD SDLAVITERG IRLDESIQGH GLGLSICKDI VESYQGELSF
THSELGGLKV SVLLPQPH