Gene Shewmr7_3779 details

Gene Information

• Locus tag: Shewmr7_3779
• ID: 4255363
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: +
• Start bp: 4488131
• End bp: 4488694
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 638124466
• Product: diheme cytochrome c
• Protein accession: YP_739815
• Protein GI: 114049265

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACTAAAC AAGCCCATCC CCTAAGCTGG ATTGCCGGAA CCACACTCAC CGTCCTCGCC 
CTTGCGATAG GCGCCGCAGG GCTTAGCTTA ACCTTTACTG GCACAGGTTA TGCCCACGAT 
GGCTTCGAAC ATAATCAAGC CATCCCACAA AATGCAGAAT ATTCAGCAGA ATGCGGCAGC 
TGCCATATGG CGTATCCCGC AAATTTACTG CCCGCCGAAA AGTGGCAAGC AATTACCAGC 
AACCTAAGCA ACCACTTTGG TGATGATGCC AGTCTGTCGC CTGAAGCAAC GGCTAGAATT 
GAGCAATATC TCGTTCAACA TGCTGCGCAA AATGGTAAGG TGATGAAAAA TAGCAAACCT 
TTGATTGACG GCATGGGGCC GCAGAAAATT ACCGAGCAGG CATTTTTTAT CCGTAAGCAC 
GATGAGATCC CAAGACGCAT GGTGCAAGAT AACCCCAAAG TCGGCTCATT CAGCCAATGC 
AGCAATTGCC ATAACCTCGC AGAGAAGGGC ATATTCGATG AAGATACCGT TAATATTCCT 
GGCTTTGGCC GCTGGGATGA TTAA 

 

Protein sequence

MTKQAHPLSW IAGTTLTVLA LAIGAAGLSL TFTGTGYAHD GFEHNQAIPQ NAEYSAECGS 
CHMAYPANLL PAEKWQAITS NLSNHFGDDA SLSPEATARI EQYLVQHAAQ NGKVMKNSKP 
LIDGMGPQKI TEQAFFIRKH DEIPRRMVQD NPKVGSFSQC SNCHNLAEKG IFDEDTVNIP 
GFGRWDD