| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3774 |
|---|
| Symbol | |
|---|
| ID | 4255358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4484959 |
|---|
| End bp | 4485876 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638124461 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_739810 |
|---|
| Protein GI | 114049260 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGATA GACTACAAGC CATGCAAATT TTTATGCGGG TGGCTGAATT AGAGAGTTTT
ACTCAAGCCA GTATCAGCCT AGGCCTGTCG AAAACCCATG TGTCGAATGT CGTAGCCCAG
TTCGAAACCG CTCTAGGCGC ACGTTTACTA CAACGAACCA CTCGAACGGT GCGTCTCACT
CAAGATGGCA TAAGTTGTTA TGAACGCTGT AAAAACTTGC TCACCGACTA TCAAGAATTA
GAAAGCCTTT TCCAACTGCA GGCGACGCAA GTTTCGGGTC GCTTAAGAGT CGATATGTCC
ACAGGAATTG CCCGAAACTT AGTGCTTCCC CATCTTCCTG ACTTTATTGA GCAATATCCG
CAAATTGAGT TGGAGCTAAG CAGTACCGAC CGCAAGGTCG ATATCGTCGC CGAAGGTTTT
GACTGCGTGA TCCGCGTTGG TAGCGTGCAG CAAGAAGGTG TTATCGCTAA GAAGATTGGC
TACTTTAAGA TGCTGAACTG CGTTAGCCCA AGCTATATCG CAAAATACGG TAAACCATCG
AGTTTAGAAG AGCTTAGCCA AGGGCATAAG CTTATCCATT ACGTTGGCCA ATTGGGCGGC
AGCGATTCAG GATTTGAGTA TCTAAGCCAA GATAATCACG AACTCTGCGC CCTAGCCTTA
CCAAAGCTAA TCACAGTCAA TAATGCCGAT GCCTACAGCG CGGCCTGTCT GGCGGGTTTA
GGGATTATTC AAGCGCCAAA TATTGGGGTG GCAAAATATC TTCAAACTGG CGAACTGATA
GAGATCTTGC CAGATTACCC TGCGCCCTCA ATGCCTGTGA GCTTGCTCTA TCCCCATAGA
CGCCATCTTT CAAAGCGTCT TCAGGTATTT ATGGCTTGGT TAACCGAATT GCTAACGCCT
TTTTTAGTAT CGCGTTAA
|
|---|
| Protein sequence | MQDRLQAMQI FMRVAELESF TQASISLGLS KTHVSNVVAQ FETALGARLL QRTTRTVRLT
QDGISCYERC KNLLTDYQEL ESLFQLQATQ VSGRLRVDMS TGIARNLVLP HLPDFIEQYP
QIELELSSTD RKVDIVAEGF DCVIRVGSVQ QEGVIAKKIG YFKMLNCVSP SYIAKYGKPS
SLEELSQGHK LIHYVGQLGG SDSGFEYLSQ DNHELCALAL PKLITVNNAD AYSAACLAGL
GIIQAPNIGV AKYLQTGELI EILPDYPAPS MPVSLLYPHR RHLSKRLQVF MAWLTELLTP
FLVSR
|
|---|
| |