| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3771 |
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| Symbol | |
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| ID | 4257633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4480242 |
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| End bp | 4482101 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638124458 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_739807 |
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| Protein GI | 114049257 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTAA AACCGCATTT TCCAACCACA CAGGCATGGT TAACCGATTC ATGGCAGCGC
AGCTTAGGTG CTGGCTTATC AGAGTTTCGT GCTGGTGAGG ATCTCAGGCT CACGCGCGCG
GAGCTCAAAC ATAAACATGA GCAATATCAG CAGCTCATCG AATTAGTGCA ATCCCATGCC
TTACCGCTGT TTAATCAACT GATGGCGCAC TCCAATAGTC GATTATTGCT CTCCGATGCC
GACGGTTATG TGCTGAAACA TTGGGGGGTG AGCCGCTATT CCAGCAAGCT GGCGGATGTG
GCGCTCGATA TTGGGGTCAA CTGGCTCGAA AAGTATAAGG GCACCAATGC AATAGGCACG
GCGCTCACGG CCAAGCAGGC GGTATCAGTG GTCGGTGAGC AGCATTTTAT CCGCCAAAAC
CGTTTTATGA GTTGCACCGC TTGCCCGATT TTTTCGCCTC AAGGCGAGAT GCTCGGAGTG
CTCGATATTA CCAGTGAGCA GCAACGGCAT TCGCAGCAAA CCTTGATGCT AGTGTCGAGC
CTAGCGCAGC AGGTCGAAAC GGCGCTGCTG TGTCATCTGC CCGATAGTCA TTATCGAATC
GATTTCGCGG CGCAGCCGAG TCTATTAAAT TCCGGTTGGC AAGGCATAGT TATCGCCAGC
AGTGACGGGC GAATTGTGGG CTGTAATCCC ATGGCGAAAC AGCTGCTGAG TCAGGCCAAG
TTGGGTGACA GTTTAGATCA ACACCTCGGC GACAATTGGG CACGAGCGGG GGGCTTTCAC
CGCGATTCGG CGCTGCATGT GCAGACGCAA GCGCTGGCAC TGACACAGAC GAAAAGTTCC
AGAACCCTTC AAGATAAACC CTTGAACCAA TTAGGGGTCA GGTTTCGCGA TCCGCTATTG
GAGCGGGCCT GGCAGCAGGC GAACAAGGTG ATTACTAAGC AGATCCCCCT ACTGGTACTA
GGCGAAACGG GTGTCGGCAA GGAGCAATTT GTGAAAAAGC TCCACGCCCA GAGTGCCCGC
CGCTCGCAGC CCTTGGTGGC GGTGAACTGC GCCGCCTTGC CTGCGGAGTT GGTTGAGTCA
GAGTTATTTG GTTATCAGGC GGGGGCTTTT ACCGGTGCCA ATCGAACTGG TTTTATCGGT
AAGATCCGCC AAGCCCACGG TGGCTTTTTA TTCCTCGATG AAATTGGTGA GATGCCGCTG
GCGGCGCAGA GCCGTTTACT CCGGGTGTTG CAGGAGCGCG AGGTCGTTCC CGTCGGCAGT
AATCAAAGTT TTAAGGTCGA TATTCAGATC ATCGCCGCGA CCCATATGGA TTTAGAGTCG
CTGGTGGCGC AGGGATTGTT CCGTCAGGAC TTGTTTTATC GCCTAAATGG ATTGCAAGTG
CGGCTTCCTG CACTGCGTGA ACGGCAGGAT ATTGAGCGCA TCATCCATAA ATTGCACCGC
CGTCACCGCA GTAGCGCGCA AACCTTGTGT ACTGAGTTGT TGGCGCAGCT AATGCGTTAC
GATTGGCCCG GTAACCTAAG GGAGTTGGAT AACTTAATGC AGGTGGCGTG TTTGATGGCC
GAAGGTGAGG CTGTACTCGA GATAACTCAT CTCCCCGATT ACCTGGCTCA AAAGCTCATG
AATCTGGCGT TTGAGCCCCA AACTTTAACT GAAGTCGTCG ACGCTGAAAC CACGAAGCAT
CCGCACGAAC TGTCCGAGTC TAGCTCCGCC ACCATAGACT CGCTCCACGG AACCATAAAT
CTGAACGTGT TACAGGCTTA CCGCGCCTGC GAGGGCAATG TGAGCCAATG TGCTAAGCGT
TTGGGGATTA GCCGTAATGC CTTGTATCGC AAGTTAAAAC AGCTAGGGAT TAAGGACTAA
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| Protein sequence | MTVKPHFPTT QAWLTDSWQR SLGAGLSEFR AGEDLRLTRA ELKHKHEQYQ QLIELVQSHA
LPLFNQLMAH SNSRLLLSDA DGYVLKHWGV SRYSSKLADV ALDIGVNWLE KYKGTNAIGT
ALTAKQAVSV VGEQHFIRQN RFMSCTACPI FSPQGEMLGV LDITSEQQRH SQQTLMLVSS
LAQQVETALL CHLPDSHYRI DFAAQPSLLN SGWQGIVIAS SDGRIVGCNP MAKQLLSQAK
LGDSLDQHLG DNWARAGGFH RDSALHVQTQ ALALTQTKSS RTLQDKPLNQ LGVRFRDPLL
ERAWQQANKV ITKQIPLLVL GETGVGKEQF VKKLHAQSAR RSQPLVAVNC AALPAELVES
ELFGYQAGAF TGANRTGFIG KIRQAHGGFL FLDEIGEMPL AAQSRLLRVL QEREVVPVGS
NQSFKVDIQI IAATHMDLES LVAQGLFRQD LFYRLNGLQV RLPALRERQD IERIIHKLHR
RHRSSAQTLC TELLAQLMRY DWPGNLRELD NLMQVACLMA EGEAVLEITH LPDYLAQKLM
NLAFEPQTLT EVVDAETTKH PHELSESSSA TIDSLHGTIN LNVLQAYRAC EGNVSQCAKR
LGISRNALYR KLKQLGIKD
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