| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3764 |
|---|
| Symbol | |
|---|
| ID | 4257627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4473667 |
|---|
| End bp | 4475082 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638124452 |
|---|
| Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
|---|
| Protein accession | YP_739801 |
|---|
| Protein GI | 114049251 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATGA GTGAACAAGT GTGGATCCTC GACGATGACA GTTCGATACG TTGGGTGCTC
GAAAAGGCGC TCCAAGGCGC TAAACTCAGC ACCGCCAGCT TTGCCGCGGC CGAATCACTC
TGGCAAGCAT TAGAGATTTC CCAGCCACGA GTCATAGTCT CAGATATTCG TATGCCGGGC
ACCGATGGCT TAACCCTGTT AGAAAGGCTG CAAATCCACT ATCCGCATAT TCCGGTCATC
ATCATGACAG CGCATTCGGA TTTAGACAGT GCCGTCAGTG CCTATCAGGC GGGGGCATTT
GAGTATTTGC CCAAACCCTT CGATATCGAT GAGGCGATTT CCCTCGTCGA GCGCGCCCTA
ACCCATGCAA CCGAGCAAAG CCCCACACCT GCGGTGCAGG AAACGCAAGT CAAAACGCCC
GAAATCATAG GCGAAGCGCC CGCCATGCAG GAGGTATTTC GCGCCATCGG CCGGTTATCA
CGCTCCTCAA TCAGCGTGCT GATCAACGGC CAATCGGGTA CGGGTAAAGA GCTGGTTGCA
GGCGCATTGC ACAAACACAG CCCGCGTAAA GATAAGCCCT TTATCGCCTT GAATATGGCG
GCAATTCCCA AAGATCTAAT CGAATCAGAA CTCTTCGGCC ATGAGAAAGG CGCCTTCACC
GGCGCAGCAA ACGTGCGCCA AGGACGCTTC GAGCAAGCCA ATGGCGGCAC CCTGTTTTTA
GATGAAATAG GCGATATGCC GCTGGATGTG CAAACCCGCC TGCTGCGGGT GCTCGCCGAT
GGGCAATTTT ATCGCGTCGG CGGCCATAGC GCCGTCCAAG TGGATGTGCG CATTATTGCC
GCTACTCACC AAGATCTGGA GCAACTCGTA CTCAAAGGGG GATTTAGGGA AGACCTATTC
CATCGGCTCA ATGTTATCCG CGTCCACTTG CCGCCGCTGT CACAACGCCG TGAGGATATT
CCCCAACTCG CGACCCACTT TTTAGCCTCC GCCGCTAAGG AGATTGGTGT CGAGGCAAAA
ATCCTCACCA AAGAGACCGC CGCCAAGCTA TCGCAACTGC CTTGGCCCGG GAACGTGAGA
CAACTCGAGA ACACCTGCCG CTGGCTCACG GTAATGGCCT CAGGGCAAGA AATCCTGCCC
CAGGATTTAC CCCCAGAGCT ACTTAAAGAG CCCGCCAGCA TTAACCCTAT GGCAAAAGGC
AGCCAAGATT GGCAATCGGC ACTCACAGAG TGGATTGACC AAAAACTGTC TGAGGGAAAT
AGCGATTTAT TAACTGAAGT TCAGCCGGCC TTTGAACGTA TTTTGCTCGA AACCGCATTA
CGCCATACCC AAGGGCATAA ACAAGAAGCG GCAAAACGTT TAGGTTGGGG AAGAAATACC
TTAACGCGAA AATTGAAAGA ACTGTCTATG GATTAA
|
|---|
| Protein sequence | MRMSEQVWIL DDDSSIRWVL EKALQGAKLS TASFAAAESL WQALEISQPR VIVSDIRMPG
TDGLTLLERL QIHYPHIPVI IMTAHSDLDS AVSAYQAGAF EYLPKPFDID EAISLVERAL
THATEQSPTP AVQETQVKTP EIIGEAPAMQ EVFRAIGRLS RSSISVLING QSGTGKELVA
GALHKHSPRK DKPFIALNMA AIPKDLIESE LFGHEKGAFT GAANVRQGRF EQANGGTLFL
DEIGDMPLDV QTRLLRVLAD GQFYRVGGHS AVQVDVRIIA ATHQDLEQLV LKGGFREDLF
HRLNVIRVHL PPLSQRREDI PQLATHFLAS AAKEIGVEAK ILTKETAAKL SQLPWPGNVR
QLENTCRWLT VMASGQEILP QDLPPELLKE PASINPMAKG SQDWQSALTE WIDQKLSEGN
SDLLTEVQPA FERILLETAL RHTQGHKQEA AKRLGWGRNT LTRKLKELSM D
|
|---|
| |