| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3753 |
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| Symbol | |
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| ID | 4257616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4460912 |
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| End bp | 4462369 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638124441 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_739790 |
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| Protein GI | 114049240 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.580016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAATC ACGTTTGGAA TGATAAAAAG AAGTTTATTT GGTTGCTGTC AGTATTGTTA
CTGGTGGCCT TTTTAGTCAC CAGTGGCATT AGTTATAAAG TGGCCCATGA CTCCTTGAGT
CAGCAGATTG AGAGCAATAC TTTACCCCTA ACCAGTGACA ATATTTATTC TGAAATTCAG
CAGGATCTGC TTCGTCCCAT CTTTATCTCC TCGCTTATGG CGCAGGATAC CTTTGTGCGT
GACTGGATGT TAAACCATGA ACAAGAACCC GAAAAACTGA TCCGTTATCT CAAAGAAATC
CAAGATAAAT ACGACACAGT CACCAGCTTT TTTGTCTCGG AGCAGAGCCG TAATTACTAC
CATTCTTCGG GAGTCCTAAA GAAAATCCAA GATATCGACC CAAACGATGC CTGGTATTTC
CGCGTTCGCT CTTTGCCCGA ATCAGAACAT TACGAAATAA ATATCGATGC CGATACCGCG
GATCGGACCA AAACAACCGT ATTTGTTAAC TACAAAGTTT TCGATTTTGA CGGTAAGTTT
ATTGGCGTCA CTGGTGTTGG CCTTGCGGTT GAAAAGGTCA AGGCACTGAT CGAACTCTAT
CAGAAACGTT ACAATCGCCG GGTATTTTTC ATCGATAGGC AGGGTAATGT CACCCTCCAT
GGCGATGAGT ATGACGGTGC TGATTCATTA CAGACTAGCG CCGGACTCGA GCAGCTTGCC
ACGCGGATTC TGACTAGCCC GAGCGCGGCC TTTAGCTATC AGCGAAACGG TAAAACTGCC
TATCTAAACA GCCGCTTAGT ACCCGAGTTC AAGTGGTATC TTATCGTTGA GCAGGAAGAT
GCGCCGCAGG AGCAAGAACT GCTGAATACC TTTTGGGGTA ACTTAGGTTT AAGTTTGCTG
GTAACGATTG GGGTTTTGCT GATTTCAAAC ATGACCTTAG GCCGTTATCA GCGCAAGCTT
GAGATCATGG CCTCAACCGA CAAACTGACC GGCGCCGCGA ATCGCCAAGT ATTTGAAGAA
TATTTCCATC AGGCATTAGA GAAGGCAAAG CTATCCAAGC AAGCGATTTC AATCCTCCTT
GTCGATATCG ACCACTTTAA AAAAGTGAAT GATAGCTATG GTCATAGCAT TGGTGATTTA
GTATTAAAAA CCGTCACTAA CCTGCTGCGT AGTCAGTTAA AAGAGCAGGA TGTACTTTGC
CGTTGGGGCG GCGAGGAGTT TATCGTGTTA TTGCCAGAGA TGGATCTTAG CCATGCCGCT
GAATTAGCGG AGCATTTCCG TGATTTAATT TTCCAGCGCG AATTAAAAGT CAATGGTGTG
CACATCGCTA TCACTGTGAG TATTGGGGTT GCCGAATACC AAAAACTTGA GCCCGCAGAA
GATTTGATTA AACGAGCGGA TCTCGCCTTG TATCAGGCGA AAGAAGCGGG GCGCAATCAA
GTGGTTCTCA ATCAGTAG
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| Protein sequence | MGNHVWNDKK KFIWLLSVLL LVAFLVTSGI SYKVAHDSLS QQIESNTLPL TSDNIYSEIQ
QDLLRPIFIS SLMAQDTFVR DWMLNHEQEP EKLIRYLKEI QDKYDTVTSF FVSEQSRNYY
HSSGVLKKIQ DIDPNDAWYF RVRSLPESEH YEINIDADTA DRTKTTVFVN YKVFDFDGKF
IGVTGVGLAV EKVKALIELY QKRYNRRVFF IDRQGNVTLH GDEYDGADSL QTSAGLEQLA
TRILTSPSAA FSYQRNGKTA YLNSRLVPEF KWYLIVEQED APQEQELLNT FWGNLGLSLL
VTIGVLLISN MTLGRYQRKL EIMASTDKLT GAANRQVFEE YFHQALEKAK LSKQAISILL
VDIDHFKKVN DSYGHSIGDL VLKTVTNLLR SQLKEQDVLC RWGGEEFIVL LPEMDLSHAA
ELAEHFRDLI FQRELKVNGV HIAITVSIGV AEYQKLEPAE DLIKRADLAL YQAKEAGRNQ
VVLNQ
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