Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3749 |
Symbol | |
ID | 4257612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4455754 |
End bp | 4457403 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638124437 |
Product | electron-transferring-flavoprotein dehydrogenase |
Protein accession | YP_739786 |
Protein GI | 114049236 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.986729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0743978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCG AATCAATGGA ATTCGATGTT GTTATCGTCG GCGCAGGCCC AGCTGGCTTG GCCACTGCGT GTCGATTGAT GCAGATATCA CAGAGTTCAG GTAAAGAAAT GACCGTCTGC GTGGTAGAAA AAGGCTCCGA AGTCGGTGCG CACATTCTAT CGGGCGCCGT GTTTGAACCT AGGGTTCTAG ATGAGCTATT CAGCGACTGG CGCGATTCAG GCGCTCCCGT TACCACAGCC GTGACCCACG ATGAAATCTA TCTACTCAAT TCCGCCACCG ACAGCAAGCT GATGCCCAAT GCGTTTGTGC CTAAAACCAT GCACAACGAA GGCAACTATA TTGTCAGCGT AGGTAACCTC TGCCGTTGGC TCGCGACCCG CGCCGAAGCG CTCGGCGTAG AAATCTTCCC AGGCTTTGCT GCCAGCGAAT TACTCTTCAA TGAAGATAAC AGCGTGAAGG GCATCCTGAT TGGCGACATG GGTATAGGTG CCGACGGCCA ACCGAAGGAC AGCTTTATGC CCGGCATGGA GCTACATGCC AAATATACTG TGTTCTCAGA AGGTTGTCGT GGTCACTTAG GCAAACAGCT GATCGCGAAA TACCACTTAG ATAATGGCAA GACTCCACAG CATTACGGCC TAGGCTTTAA AGAAATCTGG AAAGTCCCCG CCGAACAACA CGAGCAAGGT AAAGTGGTGC ACACAGGTGG TTGGCCATTA ACCGATGGCG CATCGGGTGG CGGCTTCCTC TACCATATGG AAGACAACCA AATTGCCGTG GGGCTGATTA TCGACCTCAA CTACAAGAAT CCCCATTTAA GCCCGTTCGA TGAGTTCCAG CGTTATAAGA CTCACCCAGT TATCGCCAAA TACTTAACCG GCGGTGAACG TTTGAGCTAT GGTGCTCGCG CAATCACTAA GGGCGGCCTG AACTCACTGC CGAAGATGAG TTTCCCCGGC GGTCTGCTGA TTGGTTGCGA TGCGGGTACC TTAAACTTTG CCAAGATCAA AGGCACCCAC ACCGCCATGA AGAGCGGTAT TGTCGCGGCC GAAACCTTAG CCAAAGCGAT GCTGGCCGAG GTCGAAGGCG GTAAAGATCT AGATTGTTTC CAAACCCATC TGGAAGAAAG CTGGTTACAC GAAGAGTTAT ATAAGTCGCG CAACTTTGGC CCTGCAATGC ACAAGTTTGG CACTTTCCTC GGCGGCGCAT TTAACTACAT AGATCAAAAC TGGTTCGGCG GTAAGTTCCC TATCACCCTG CGTGATGAGC ACCCAGACTA TGCACAAATG GCCCCAGTCA GCGCCTACAG CAAGATTGAT TATCCCAAGC CCGATGGCAA ACTCAGCTTC GATAAGCTCT CTTCAGTCTA TCTGTCGAGC ACTTATCATG AGGAAGACCA GCCTTGCCAT CTGCGCTTAA AAGACAACAG CATCCCGCTC GGGATAAACC TGACGCAATT TAACGAGCCA GCTCAGCGTT ACTGCCCTGC CGGCGTATAC GAAATCGTTG AGGAAGCAGG TCAGCCTAAG TTTGTGATCA ATGCACAAAA CTGCATCCAC TGCAAAACCT GCGACATTAA AGACCCTAGC CAAAACATTA CTTGGGTGAC GCCCGAGGGC GGCGGTGGTC CAAACTACCC AAATATGTAA
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Protein sequence | MERESMEFDV VIVGAGPAGL ATACRLMQIS QSSGKEMTVC VVEKGSEVGA HILSGAVFEP RVLDELFSDW RDSGAPVTTA VTHDEIYLLN SATDSKLMPN AFVPKTMHNE GNYIVSVGNL CRWLATRAEA LGVEIFPGFA ASELLFNEDN SVKGILIGDM GIGADGQPKD SFMPGMELHA KYTVFSEGCR GHLGKQLIAK YHLDNGKTPQ HYGLGFKEIW KVPAEQHEQG KVVHTGGWPL TDGASGGGFL YHMEDNQIAV GLIIDLNYKN PHLSPFDEFQ RYKTHPVIAK YLTGGERLSY GARAITKGGL NSLPKMSFPG GLLIGCDAGT LNFAKIKGTH TAMKSGIVAA ETLAKAMLAE VEGGKDLDCF QTHLEESWLH EELYKSRNFG PAMHKFGTFL GGAFNYIDQN WFGGKFPITL RDEHPDYAQM APVSAYSKID YPKPDGKLSF DKLSSVYLSS TYHEEDQPCH LRLKDNSIPL GINLTQFNEP AQRYCPAGVY EIVEEAGQPK FVINAQNCIH CKTCDIKDPS QNITWVTPEG GGGPNYPNM
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