| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3740 |
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| Symbol | |
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| ID | 4257603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4448635 |
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| End bp | 4449312 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124428 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_739777 |
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| Protein GI | 114049227 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.026682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATAC TTTTAGTTGA AGATGATGCG ACAACGATCG ATTACATCGT TAAAGGATTT
CTTGAGCAGG GACATAATAT TGAGACCGCC AGCGATGGTC ATCAAGGCTT GCTGCAAGCC
ACGAGTGGTC AGTACGACCT CTTAATTCTC GACCGCATGT TGCCCCAACT CGATGGTTTG
AAGCTGCTGG CCGCCCTCAG AGCCACGGGT AACCAAACCC CAGTGCTTAT CCTGTCGGCG
CTGGCCCATG TGGATGAAAG GGTGAAAGGC CTGCGTGCGG GCGGCGATGA TTATATGACT
AAGCCCTTTG CCTTTTCGGA GCTGCTCGTG CGTGCCGAGA AGTTGATGCA ACGGGGTCAA
TCCGTCCCTA TTACCACAGA TTTAGTGGTC GGTGGCTTAA AAATGGAGCT GCTCACCCGC
AATGTGACTT TAGATGGTCA CGATTTAATG CTGCAACCCA AAGAATTCCA ACTGCTTAAG
TATTTGATGG AACACGCCAA TCAGGTTATT AGCCGCACGC TACTATTCGA AGCTGTGTGG
GATTATCACT TCGATCCCCG TACGAATGTG ATCGACGTGC ATATCGCCAA GTTACGCCGC
AAGTTTGAAG AGTTAGGCCA CGGTGAATTG ATTGAAACCG TAAGGGGAGC GGGTTATCGC
TTACGCCAAA GGCATTAA
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| Protein sequence | MKILLVEDDA TTIDYIVKGF LEQGHNIETA SDGHQGLLQA TSGQYDLLIL DRMLPQLDGL
KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGQ
SVPITTDLVV GGLKMELLTR NVTLDGHDLM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW
DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH
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