| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3728 |
|---|
| Symbol | |
|---|
| ID | 4254868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4437931 |
|---|
| End bp | 4439001 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638124416 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739765 |
|---|
| Protein GI | 114049215 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000279233 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTAG ATCCTAACAC CATTCAAACT GCCCCAACTC AGGATCAACG CTTTCGTAAT
GAAGCGCCAA ACACTCACAG TGGTGAAGGT AATTTACCAG CCATTTTATG GCGTTATGTC
ACTGAACGCA TTCCCGATAA GACTCCGAGC CAAGCGCTAC CTATTCAGCC CATGCAACTA
TCCGCCACGG CGGAGGCAAC GCCTATGCTG TATAAAATCA GCCACTCCAC TGTGCTGTTA
CAGCTAAACG GCCAGTATTG GTTAACCGAT CCTGTGTTTT CAAAGCGCGC CTCACCAAGC
CAATGGTTTG GTCCAAAACG TTTTCACGCT CTGCCCATTG AGCTCGAAAA TATTCCTCCG
CTCGCTGGGA TTATCTTGTC CCACGATCAT TATGATCACT TAGACAAGCA AAGCGTAGTG
GCGCTCGCTT CGCGCACTCA GAAGTTTATT GTGCCACTGG GTGTCGATAA ACATTTGATT
GCTTGGGGGA TACCGAAGGA AAAAATTATC ACCCTGAACT GGTGGCAAAC AACCGAACAT
CAAGGTGTGC GCTTTACCGC CACGCCCGCA CAACATTTTT CGGGCCGAGG ACTGAAAGAC
AGAAATCAAA CCCTGTGGGC ATCTTGGGCT ATTCAATCCC CTGAATTAAA TATCTTTTTC
AGTGGCGACT CAGGCTATTT TGATGGTTTT AAAAAGATTG GCGATAAACT GGGCCCCTTC
GACCTAACCT TAGTCGAAAC CGGTGCCTAC GATGAGATGT GGGCCGATAT TCACATGCAG
CCTGAGCAAT CGCTGCGGGC GCATTTAGAT CTTCAAGGTC AATACCTTAT CCCAATTCAC
AACAGCAGTT TCGACTTAGC GCTGCACAGT TGGTACGACC CCTTAGAGCG GATTGCCGCG
GCGGCGAAAG CCTATGCCGT CCCCCTGCTG ACTCCTGAAT TTGGTCAGGG GATTAACCTC
AATGATCTAG CCCACAGCCC AGCGCTCAAT CAAGGGTGGT GGAAGTCATT CTTACCCAAG
GACAGACCCG AGTTTGAAGT AGTTCCAGTC AAACTCGCCT CCAACAAATA G
|
|---|
| Protein sequence | MTLDPNTIQT APTQDQRFRN EAPNTHSGEG NLPAILWRYV TERIPDKTPS QALPIQPMQL
SATAEATPML YKISHSTVLL QLNGQYWLTD PVFSKRASPS QWFGPKRFHA LPIELENIPP
LAGIILSHDH YDHLDKQSVV ALASRTQKFI VPLGVDKHLI AWGIPKEKII TLNWWQTTEH
QGVRFTATPA QHFSGRGLKD RNQTLWASWA IQSPELNIFF SGDSGYFDGF KKIGDKLGPF
DLTLVETGAY DEMWADIHMQ PEQSLRAHLD LQGQYLIPIH NSSFDLALHS WYDPLERIAA
AAKAYAVPLL TPEFGQGINL NDLAHSPALN QGWWKSFLPK DRPEFEVVPV KLASNK
|
|---|
| |