| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3717 |
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| Symbol | |
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| ID | 4254857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 4422425 |
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| End bp | 4423432 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638124405 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_739754 |
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| Protein GI | 114049204 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0218506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTAG TCCGAAGCGG AGCTGTCGCT CAATTTGAGC AATTAGTCCT AGAATTGGGG
GAAAACCCCA TCGAAATGAT CCAACAGGCT GGCCTGCGTC AGGCACAGTT TCGCGATCCC
AACACCTATA TCGCCTATCC ACGCTTAGCC GAGTTATTAG AAATTGCCGC CCAACGCTGT
CAGCAACCCT TATTTGGCTT AATGTTGGCT CAGCGGCAAA CCTTGCTCGT ACTCGGGGAT
CTGCCCATGT TAGTCTCGCG TGCGGCCACA GTGGCCGATG CGCTTGCCAG GGTAAATGAC
TATCTGTATC TGCATGCCTC TGGTGTCTCA CTGCAACTGC AACCGCTGGG AGACATAGTG
CGTCTCGTGC TATCGATCAA TGTCAATAGC CCTAGGGGCA TTGATCAACT GATGCAAATG
AGTGTGGCAC AGCTGGCGAT GTTTGTTTCG AGCCTGCTCA ATATCAATAT CAGCACCCTT
CCCTTGCATT TCTGTCAAAA CAAACCAAGC GATATCGGCT CCCAACGTTT CGCTCATCTG
GCGCGTTTTC GCGAATCCTT TGATGGTGTG GTGCTTAAAA CATCGCAATT AATGGGCCGT
AACTATCACG ATGAAGAAGC GCTAAACCGA CATCTCCAAT CGCATCTGCA TTTTTTACAG
AGCCACTACC CCGACTACCT TGCCGATCAA GCTCGGGACT TAATCCACAG GCTGCTCCCC
ACGGGTGAAT GCTGTATAGA ACGGGTATCG ACGGCGCTGG GTATGCACGA AAGAACGCTA
CAGACACGGT TAAAAGAGAC GGGGCAAAGC TATCGACAAT TGCTGCAGGA TGTCAGGCAA
AATATCGCCC AGCAGCAACT CAGTTATGGC ACACAAACCA TCACCGAACT CGCATTGCAG
CTCGGTTATG CCGAAGTCGC CGTGTTTAGT CGCCACTTTA AAACCTGGAC AGGATTTTCC
CCCAAGCAAT GGCAACAGCA GTATCGTAAG GGAAAAATTG AAGATTGA
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| Protein sequence | MYLVRSGAVA QFEQLVLELG ENPIEMIQQA GLRQAQFRDP NTYIAYPRLA ELLEIAAQRC
QQPLFGLMLA QRQTLLVLGD LPMLVSRAAT VADALARVND YLYLHASGVS LQLQPLGDIV
RLVLSINVNS PRGIDQLMQM SVAQLAMFVS SLLNINISTL PLHFCQNKPS DIGSQRFAHL
ARFRESFDGV VLKTSQLMGR NYHDEEALNR HLQSHLHFLQ SHYPDYLADQ ARDLIHRLLP
TGECCIERVS TALGMHERTL QTRLKETGQS YRQLLQDVRQ NIAQQQLSYG TQTITELALQ
LGYAEVAVFS RHFKTWTGFS PKQWQQQYRK GKIED
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