| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3716 |
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| Symbol | |
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| ID | 4254856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4421526 |
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| End bp | 4422287 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638124404 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_739753 |
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| Protein GI | 114049203 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0213931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTAT TGAATAAAAC CGCCGTGGTG ACTGGGGCTG CCGGGGGCAT AGGGCAGGCC
ATCATTCGTA AACTGCTCGC CGAAGGGGCT AGCGTTGTTG CCGCCGATCT GTCTGCCGAT
GCGCTGAAAG TATTTAATGA TTTTCCTGCC GACAAGCTGT CAATCTTTAG CGTAGATGTC
ACCGATTACA GCCAAGTTGA GGCTATGGTC AAGCATGCGG CTAAGCAGTT TAGCCAGCTC
GATATTCTGA TCAATAACGC GGGTATTGGT TTGGCTAAGC CGCTGTTACT GCATGATCCC
CTAAGTGATT TTGAACCTGT CACCAATGTT AACCAAAGAG GTGTGTATCA CGGGATTCTC
GCTGGTGGGC GCCAATTCCA AGCCCAAGGC ACTCAGGGCG TGATCCTCAA TACCTCTTCT
GTTTATGCGC AAATCGCCTC AGAAATGACC TTCACCTACA ACGTCAGTAA AGCGGCCGTC
GACATGATGA CCAAATGCGC CGCGCTTGAG TTTGCACCGC TTGGCGTGCG GGTCTGTGCC
GTGGCGCCGG GCCGTGTCGA TACACCTATG TTGCGTCAGT ATGAGGCGCT GGGACTGTGG
GAACACATTC GCAAAGAACA AATGCGCCAA GAATTTACCC AACCGAATGA GATTGCCGAT
GTGGTGGCGT TTCTCGTCAG TGACGAGGCC AACTGCATCA ATGGTTGCAC AGTGAACGCC
TCCGACGGTT TTGAAAACTT TAAATATCCA CTGCTGGGGT AG
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| Protein sequence | MRLLNKTAVV TGAAGGIGQA IIRKLLAEGA SVVAADLSAD ALKVFNDFPA DKLSIFSVDV
TDYSQVEAMV KHAAKQFSQL DILINNAGIG LAKPLLLHDP LSDFEPVTNV NQRGVYHGIL
AGGRQFQAQG TQGVILNTSS VYAQIASEMT FTYNVSKAAV DMMTKCAALE FAPLGVRVCA
VAPGRVDTPM LRQYEALGLW EHIRKEQMRQ EFTQPNEIAD VVAFLVSDEA NCINGCTVNA
SDGFENFKYP LLG
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