Gene Shewmr7_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3712 
Symbol 
ID4254852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4416010 
End bp4417257 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content52% 
IMG OID638124400 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_739749 
Protein GI114049199 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.154927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATACG TGTATTCTAT TTGCAGTATT AACATGACTT TTATTGAATC TCTTACCCTG 
ATGCTGGCCC TCATGTATAT CGCATCCTTA AGCTATTGGA GCGGTAAAAA ATGGGGGGTG
GTGGCCACCT TACTCCTGAG TGTTGGCGCC GTGGCGATTA GCCTCTACTG GCCCTTGGCA
CTCGCCCTGC TCATTGCCTT GCCCCTTTCG CTTATTGCCA ATAAATTTGC CCCTGAGGAA
TTAAAGGGCG AGATAAAAAT CAACACCCTG CGTGAAGGCT GCCAACATCT GCTCGCGCTC
TCATTGTTTA TCGTCGCTAT ACAATACTGC ATCAATGCTA TCCAGCTTAA ACAAGGCATA
GTGCCTTGGT TGATGCGCCC CGATGTTGTC GATGCCTTCT TGCCTATCGC GGGCGGAATC
GAATTAAAAG CCATAGTGAC ACTCAATCTG TGGGATCAAA CCCATCCCGC CGCAGCCGTC
ATGCTCGCCG CTGTACTACT CACGGGCTTA CTCTGCAAAC GCGCCTTTTG TGGCTGGGCC
TGCCCATTAG GGCTTGCCGG CGAATATCTT TACGCCTTAC GCAAGCGCTT TATCAAGGCA
GAACTGGCGC CACCCGCATG GTTAGACTGG CCACTGCGGA TGCTGAAATA CTTATTACTG
CTGGGGCTGT TTTACATCGT CATCGGTATG CCTAGCGAGT CAATTCCCTA TTATCTGCAG
GGCAACTATC ACAAGATTGC CGACCTTAAG ATGGCGCTGT TTTTTGTCAC GCCTGGCCTC
ATCACCTTAG CCTGCTTTGC TCTTATCCTC GCCTTAGCGG CGTGGCGTCG CCAAGGTTTT
TGCCGCTACT TGTGTCCCTA TGGCGCCATG CTTGGGATCT TAAGTTTTGC CAGCCCGCTC
AAGATCCGCC GCAATACTCA ACATTGCCTG ATCGAAGCCA AGGGCATGAA GTGCGACAAA
TGTACCCGCG CCTGCCCGGC CAACATCATA GTGCACACCA AAACCACGGT ACGCAGCGAC
GAGTGCCAAG CCTGTATGCG CTGCGTCGCC GCCTGTCCTA AATCGGCGGC GCTCGGTTTT
AGCCTTAAAT CTGGCCACAG TATTAGCCAT AAGGGCTTGT TAGTCTTGTT ATTATTGGCA
CTCTTTGCCA TGCCACTCGG CGCCTATTTA GCCGGGTTCT GGCACAGCCA AACACCGGAC
AGTATCCGCA TGGAGCTTAT CCAAGTGATT GACCGAGTGG GCCATTAA
 
Protein sequence
MGYVYSICSI NMTFIESLTL MLALMYIASL SYWSGKKWGV VATLLLSVGA VAISLYWPLA 
LALLIALPLS LIANKFAPEE LKGEIKINTL REGCQHLLAL SLFIVAIQYC INAIQLKQGI
VPWLMRPDVV DAFLPIAGGI ELKAIVTLNL WDQTHPAAAV MLAAVLLTGL LCKRAFCGWA
CPLGLAGEYL YALRKRFIKA ELAPPAWLDW PLRMLKYLLL LGLFYIVIGM PSESIPYYLQ
GNYHKIADLK MALFFVTPGL ITLACFALIL ALAAWRRQGF CRYLCPYGAM LGILSFASPL
KIRRNTQHCL IEAKGMKCDK CTRACPANII VHTKTTVRSD ECQACMRCVA ACPKSAALGF
SLKSGHSISH KGLLVLLLLA LFAMPLGAYL AGFWHSQTPD SIRMELIQVI DRVGH