| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3704 |
|---|
| Symbol | |
|---|
| ID | 4254844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4409309 |
|---|
| End bp | 4409746 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638124392 |
|---|
| Product | thioesterase domain-containing protein |
|---|
| Protein accession | YP_739741 |
|---|
| Protein GI | 114049191 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.120731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.274146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAT TATTGAACCA ATTGCGCCAG ACCTGGCATA GCACCATTCC CGTTAGCGAG
TTTATGCAGA TAGCGCCAGT TTCCTTCGCC GAAGGGGAGC TACGCGTGAG TGCGCCACTG
ACGCCGAATA TCAACCTGCA TAACACTATG TTTGCGGGCA GTATTTATAC TCTTATGACG
CTCACAGGTT GGGGCATGGT GTGGCTGCAA CAGCAGCTTC AGCAGGTGGA TGGCGACATA
GTGTTAGCCG ATGCCCATAT CCGCTACATA GCGCCCGTGA CCTGTGCGGC CGAGGTCAAG
GTGCGTTGGC CTGAAACAGA TTTAAGCCCG CTGCAACGGG GGCGCAAAGC CAAAGTAAAA
CTCGAAGTAC AACTCTTTTG TGACGAAAAA CTCTGCGCTC AATTCGATGG CTTGTATGTC
AGTGTACCTA AAATGTAA
|
|---|
| Protein sequence | MDELLNQLRQ TWHSTIPVSE FMQIAPVSFA EGELRVSAPL TPNINLHNTM FAGSIYTLMT
LTGWGMVWLQ QQLQQVDGDI VLADAHIRYI APVTCAAEVK VRWPETDLSP LQRGRKAKVK
LEVQLFCDEK LCAQFDGLYV SVPKM
|
|---|
| |