Gene Shewmr7_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3700 
Symbol 
ID4254910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4407312 
End bp4407887 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content54% 
IMG OID638124388 
ProductXRE family transcriptional regulator 
Protein accessionYP_739737 
Protein GI114049187 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000696836 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.275941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCA TCAACAGCTA TCTTGCCGCG ACCCTAAAAC AACTGCGCAG CCAAAAGGGT 
TGGAGTTTAG ATAAGGCAGC ACTCGAGACA GGCGTAAGCA AGGCCATGAT AGGCCAGATT
GAGCGCGGCG AATCTAGCCC CACCATTGCT ACCCTGTGGA AAATCGCCAG CGGTTTTAAT
ATCTCACTCT CGACTTTTCT GGAGCCGACA CCCGAGAGCC AAGGCGCGGT CTTTCGTAAC
GCCGATGCAT TACGCCAAAA GCCTGCAACC GATGGTATGT TAGTCGCGTC GCTATTTCCC
TTTGAGCCAC GCTTTGGTTT TGAGATGTTT GAACTCACTC TATTGCCGCA CTATGAGCGC
CTCTCCGAGC CCCATGAGGT TGGCGTGACC GAGCATGTGA TTGTACTGAG CGGCACCATG
GAAGTGTTAG TCGATGGCCA GTGGCAGCCA TTACAGCAGG GCGAGGCCGT GCGCTTTGCC
GCCGATAAAC CCCACGGTTA CCGCAACTTG AGCGATCACC CCGTGGTGTT TCATGATCTT
ATCCATTACC ACAGGGAAAC GCCTGCCACC GAGTAA
 
Protein sequence
MQTINSYLAA TLKQLRSQKG WSLDKAALET GVSKAMIGQI ERGESSPTIA TLWKIASGFN 
ISLSTFLEPT PESQGAVFRN ADALRQKPAT DGMLVASLFP FEPRFGFEMF ELTLLPHYER
LSEPHEVGVT EHVIVLSGTM EVLVDGQWQP LQQGEAVRFA ADKPHGYRNL SDHPVVFHDL
IHYHRETPAT E