Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3700 |
Symbol | |
ID | 4254910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4407312 |
End bp | 4407887 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638124388 |
Product | XRE family transcriptional regulator |
Protein accession | YP_739737 |
Protein GI | 114049187 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000696836 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.275941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCA TCAACAGCTA TCTTGCCGCG ACCCTAAAAC AACTGCGCAG CCAAAAGGGT TGGAGTTTAG ATAAGGCAGC ACTCGAGACA GGCGTAAGCA AGGCCATGAT AGGCCAGATT GAGCGCGGCG AATCTAGCCC CACCATTGCT ACCCTGTGGA AAATCGCCAG CGGTTTTAAT ATCTCACTCT CGACTTTTCT GGAGCCGACA CCCGAGAGCC AAGGCGCGGT CTTTCGTAAC GCCGATGCAT TACGCCAAAA GCCTGCAACC GATGGTATGT TAGTCGCGTC GCTATTTCCC TTTGAGCCAC GCTTTGGTTT TGAGATGTTT GAACTCACTC TATTGCCGCA CTATGAGCGC CTCTCCGAGC CCCATGAGGT TGGCGTGACC GAGCATGTGA TTGTACTGAG CGGCACCATG GAAGTGTTAG TCGATGGCCA GTGGCAGCCA TTACAGCAGG GCGAGGCCGT GCGCTTTGCC GCCGATAAAC CCCACGGTTA CCGCAACTTG AGCGATCACC CCGTGGTGTT TCATGATCTT ATCCATTACC ACAGGGAAAC GCCTGCCACC GAGTAA
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Protein sequence | MQTINSYLAA TLKQLRSQKG WSLDKAALET GVSKAMIGQI ERGESSPTIA TLWKIASGFN ISLSTFLEPT PESQGAVFRN ADALRQKPAT DGMLVASLFP FEPRFGFEMF ELTLLPHYER LSEPHEVGVT EHVIVLSGTM EVLVDGQWQP LQQGEAVRFA ADKPHGYRNL SDHPVVFHDL IHYHRETPAT E
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