Gene Shewmr7_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3688 
Symbol 
ID4254898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4390928 
End bp4392151 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content55% 
IMG OID638124376 
Product3-oxoacyl-(acyl carrier protein) synthase I 
Protein accessionYP_739725 
Protein GI114049175 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACA GAGTCGCCAT TACACAGATT GGATTGTGTA CCCCGTTAGG GCAAACGCCC 
GAGCAGGTGT TAGCCCGCTT GATTGCAGGC GATACCAGTG CCATGCAAAC CAGTGACACC
CTGTTATTTG GTGAGTCGAC ACTGGTCGCG CCCGTCACTG AGCCGTTACC GACGATACCT
GCCGCACTGG CGCAATTCGA TTGTCGCAAT AATCAGTTAC TCCTGGCTGC CGCATTGCAA
ATTCGCGACG CCGTAGAGCA AGCCAAAAGT GACTTTGGCG CCGACCGCAT CGGCGTGGTC
TTAGGCACCA GCACCTCGGG GATTTCGAAG GGCGAAGCCG CCTTGGCCTA TCGCAATCAA
CACGGCCACT TCCCAGCCGA TTACCATTAC TTCCAACAGG AATTGGGCAG CACCAGCGAT
TTTTTACGCC AGTTATTTGA GCTCCAAGGC CCCTGCTACA CCATTTCGAC CGCCTGCTCA
TCCAGCGCTA AGGTATTTGC CAGCGCCAAG CGCCTACTCG AGGCCAAGCT GTGCGATATG
GTGATCGTTG GCGGTATCGA CAGCCTGTGC CAACTGACAG TCAACGGGTT TCACGCCTTA
GAGTCGGTTT CCAAAGGACA TTGCAATCCC TTCAGCGCCA ATCGCGATGG CATCAATATC
GGTGAAGGCG CCGCGCTATT TACCCTGACC CTAGCGGAAA ACGAAACACT CGGCCCAACG
CAAGCGAACG TATTGCTTGC AGGCATAGGC GAGTCGAGCG ATGCACACCA TATGTCGGCG
CCGCACCCCG AAGGTGCGGG AGCAATTGCC GCCATGCAGG CCGCGCTTGA TGATGCACAG
ATTTCGGCGC AACAGATTGA TTATATAAAC TTACATGGCA CAGCAACGCC TAAAAATGAT
GCGATGGAAA GCCGCGCCGT ACTCTCAGTA TTTGGCGACA CGCCACCACC AGCAAGCTCA
ACTAAACCTC TGGTTGGCCA TACCTTAGGT GCCGCGGGCG CGATTGAAGC CGCATTTTGT
TATTTACTGC TCTCACCCCA TAATCACCAT CTTGCCCTGC CTCCCCATAG GTATGATGGG
CGGCCAGATC CACAGGATCC CAGCATAGCC TTAGTCGCGC CCAAGCAATG CGCCGAACAT
GGCAAGCTTA ACTATGTGAT GAGCAACTCC TTCGCCTTTG GTGGCAGCAA TGCCAGCCTG
ATTTTTTGCC GTAAAGGGGC TTAA
 
Protein sequence
MNNRVAITQI GLCTPLGQTP EQVLARLIAG DTSAMQTSDT LLFGESTLVA PVTEPLPTIP 
AALAQFDCRN NQLLLAAALQ IRDAVEQAKS DFGADRIGVV LGTSTSGISK GEAALAYRNQ
HGHFPADYHY FQQELGSTSD FLRQLFELQG PCYTISTACS SSAKVFASAK RLLEAKLCDM
VIVGGIDSLC QLTVNGFHAL ESVSKGHCNP FSANRDGINI GEGAALFTLT LAENETLGPT
QANVLLAGIG ESSDAHHMSA PHPEGAGAIA AMQAALDDAQ ISAQQIDYIN LHGTATPKND
AMESRAVLSV FGDTPPPASS TKPLVGHTLG AAGAIEAAFC YLLLSPHNHH LALPPHRYDG
RPDPQDPSIA LVAPKQCAEH GKLNYVMSNS FAFGGSNASL IFCRKGA