Gene Shewmr7_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3685 
Symbol 
ID4254895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4386259 
End bp4388778 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content52% 
IMG OID638124373 
Producthypothetical protein 
Protein accessionYP_739722 
Protein GI114049172 
COG category[R] General function prediction only 
COG ID[COG4258] Predicted exporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCA AGATTGCCAC GCGTATTGGC CATAGCCTGA TGCAAACCTC GACTAAATGG 
CGCTTCGCTA TTTGGTTGTG TTTGATGCTG GCGGCAAGCC TGTGGACGCT GCAACTGTGG
CAAAATGGGG CTAAGGTACA AAGCGATATT CTCGCCATGC TGCCCCATCT GCAGCAGGAT
GCACTCACGG CGCGCGCCCT CGAACAAGTG GAATCGACAC TCGCCGATCA AGTGTATCTC
GCCCTGATTG CCGAGGATGA ACCTCAAGCG ATTGCGGCGG CAACACTCCT GATGGAGCAA
CTTAAGACTC AACATACCGC CTTTACCGAT ATTCGCAGCG CCGATCTACA AATGGGTGAA
GCCCTAGGGC AATTTTATTT CCCCTATCGC TTTAAACTGC TCACGCCTGA ACAAACCAAT
GCCTTAAGCC ATGATGGCCT CGAGCACTTA ATCGCCTCGG CCACTCAGCA GCTCTACAAC
GCCTTTAGTT ATGCCAACAG CCAACTCTTG ACCCAAGATC CTTTGCTGTT GTTTCCCGAC
AATTTGCTCG CCCTTGCGCC TAGTTCGAAG CTGAGCGCTA GCCAAGGGAT TTTACTTGCC
CATCCACAAA GTGTTGATAC CCAAAAAGGT GTTGATAACA GTGAAGGCGT GGCCGCCATT
GTGATGGCAA AAGGCACAGA TAGCGCCTTT AACCCTAATG CGCAGTTACG CCAGCAAGCG
GCACTCACTC AAGCGCTGAA TGCCGTCAGC GCCCAATATG CCAGCGTTAA AGTGTTACAG
GCGGGCGCAC TATTTCATGC CATAGAAGCC ACCAATACCG CGAAGAGTGA AATATCTGTC
CTCGGCCTCG CCTCTTTGCT TGGCGTAGTG TTATTGGTTT GGCTGGCGTT TCGCTCCGTG
ATGCCACTCT TGCTGGCGAT GGTGACCATA GGCAGCGGCC TGCTGCTGGC GGTGACCTTT
ACCTTAAGCG TGTTCGGAGA ACTGCATTTA CTCACTCTCG TCTTTGGCAC TAGCCTGATA
GGGATTGCCA TCGACTACAG CTTCCATTTT TACTGCGAGC GGTTAAGCGA TAATAAGCGT
AGTGCGCAGG CGACCGTGGC CTATATCTTC CCCACAGTGT CACTGGCCTT TATCACTAGC
GCCTTGGCCT ATGTTGGTAT CGGTTTAGCG CCGTTTCCCG GCATGCAGCA GGTGGCAATT
TTCTGCGCCT CAGGCTTACT CGGCGCCTAC CTGACGTTAG TGCTCGCCTA TCCATTATTG
GCGGGCAGCA AGTTGCCTTC GGGAGAACGC CCGTTAACTC TGGCACAGGC TTATCTTGCA
AAACTCACCG GATTCTCCAA TAAACTGGTC TCGCCATGGG GATTGAGTCT GTTTGCCTTA
ATGCTCGCGG GAGTTTGCCT GCTGGGGATC AGCAAGCTTA ACGTCGACGA TGATATTCGC
CATTTACAGC AAAGCCCTGC GAGCGTGACT GAACCTGAAG ACAAGCTCAG AAAATTACTC
AGTGGCGGCA CGGATAACCA GTTTTTATTG GTGCGCGCCC CCAGCGAAGA AGCCTTACTG
CAACGGCTCG AAGCCCTCAG TCCGCAGCTC GATGCCGCCA TTAAGCAGCA AGAGCTGGGC
AACTATGTCA GCCTTAGCCG TTATCTGCCA AGCAAACAAA AGCAGGACGT GGCGTATCAA
TTGCAGGGCA AGATTTACCA GTCGCAATTA ACCACAGTGC TAAACAGCAT TGGCCTAGAT
GTCGGCCTAG CACTCGAGCT TTCTGCCGCC TATCTTGCCG CCAAGGATAG CTATATCACC
CCGACACATT TTTTCGAACT GGGCCTAGGC AAACAGTTAG CCCCACTCTG GCTTGCACCA
CTGGAATTAG CGCCGCCTGA GCAATCAACA GAGTCAGAGA CCAGTTCAGA TAATACCAAC
CTAGGGAACG ATAGCCACGG CGCCATAGTG CTACTTGGTG GTATTGAAGA TATTGCGGCC
CTCAAGGCGC GCTTTGCCGA GGTTCCGCAG GTGCAGCTTA TAGATAAGGT CGCGGATATT
TCCACCGTGA TGGGACATTA TCGCCTGCTT ACCCTGAAGT TATTGGGGCT AGCACTCGTT
ATCGCCCTCT TACTATTTAG CCTGAGCTTT GGCGTTAAAA GAGCCGCCCT TGTGGTCGCC
GTACCCGCGC TGTCCGCCTT ACTCACCTTG GCCATTTTAG GCTTAGTCGG CTCGCCCTTA
AGCTTGTTTC ATGCGCTGGC GCTGATTTTA GTCTTCGGGA TTGGGATAGA TTACAGTTTG
TTCTTTGCCT CTGCAGCGCA ACATGGCAAG GCAGTGATGA TGGCGGTGTT TATGTCCGCC
TGCTCGACCC TATTGGCCTT TGGCTTACTC GCCTTTAGCC AAACCCAAGC TATTCATTAT
TTTGGGTTAA CTCTATCCCT CGGCATAGGG TTTACCTTTG TACTTTCGCC ATTGATTTTG
ACCACCAGTC AGGTTTTAAC CACCAACAAG GTCTCGATAC CTACAAGGAA TGTTATTTAA
 
Protein sequence
MAPKIATRIG HSLMQTSTKW RFAIWLCLML AASLWTLQLW QNGAKVQSDI LAMLPHLQQD 
ALTARALEQV ESTLADQVYL ALIAEDEPQA IAAATLLMEQ LKTQHTAFTD IRSADLQMGE
ALGQFYFPYR FKLLTPEQTN ALSHDGLEHL IASATQQLYN AFSYANSQLL TQDPLLLFPD
NLLALAPSSK LSASQGILLA HPQSVDTQKG VDNSEGVAAI VMAKGTDSAF NPNAQLRQQA
ALTQALNAVS AQYASVKVLQ AGALFHAIEA TNTAKSEISV LGLASLLGVV LLVWLAFRSV
MPLLLAMVTI GSGLLLAVTF TLSVFGELHL LTLVFGTSLI GIAIDYSFHF YCERLSDNKR
SAQATVAYIF PTVSLAFITS ALAYVGIGLA PFPGMQQVAI FCASGLLGAY LTLVLAYPLL
AGSKLPSGER PLTLAQAYLA KLTGFSNKLV SPWGLSLFAL MLAGVCLLGI SKLNVDDDIR
HLQQSPASVT EPEDKLRKLL SGGTDNQFLL VRAPSEEALL QRLEALSPQL DAAIKQQELG
NYVSLSRYLP SKQKQDVAYQ LQGKIYQSQL TTVLNSIGLD VGLALELSAA YLAAKDSYIT
PTHFFELGLG KQLAPLWLAP LELAPPEQST ESETSSDNTN LGNDSHGAIV LLGGIEDIAA
LKARFAEVPQ VQLIDKVADI STVMGHYRLL TLKLLGLALV IALLLFSLSF GVKRAALVVA
VPALSALLTL AILGLVGSPL SLFHALALIL VFGIGIDYSL FFASAAQHGK AVMMAVFMSA
CSTLLAFGLL AFSQTQAIHY FGLTLSLGIG FTFVLSPLIL TTSQVLTTNK VSIPTRNVI