Gene Shewmr7_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3680 
Symbol 
ID4254890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4381238 
End bp4381612 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content52% 
IMG OID638124368 
Productthioester dehydrase family protein 
Protein accessionYP_739717 
Protein GI114049167 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAGT CGAGTTTACC GCCGATCCTC GCATCAGAGA TCGGCCCAGA AAGTATTAAA 
CTGCGCCTCT TTGTCGCCGC CGATCTCGAA TATTTTAACG GCCATTTTCC CGAGCAAGCC
GTGCTCCCCG GCGTGACCCA ACTCGATTGG GCCGTGCGCT TAGGTTGCGA ACATTTTGGG
TACAACGCTG CGGTGGCTAA TTTAGAAGTA CTAAAGTTTC AACAGCTTAT TCTGCCAGGG
CAGGAAGTGA CCTTAGCCAT TAGCCATAAT GCCGCCAAAG AGAAGTTAAC CTTTGCCTAC
AGCGATGGCG ACCACCGCTA TGCCTCCGGG CGTATCAGCT TTGCTAGTCA GCAAGATGAT
GGAGCATCCC TGTGA
 
Protein sequence
MIKSSLPPIL ASEIGPESIK LRLFVAADLE YFNGHFPEQA VLPGVTQLDW AVRLGCEHFG 
YNAAVANLEV LKFQQLILPG QEVTLAISHN AAKEKLTFAY SDGDHRYASG RISFASQQDD
GASL