Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3675 |
Symbol | |
ID | 4254885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4377989 |
End bp | 4378837 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638124363 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_739712 |
Protein GI | 114049162 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.264662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAATC CTGTGCCACA CAATGCCGAA TTTAATGTCG CTTATACGCT GCCCGAAAAG CGCCGCGTGG GAATCAACTA TATTCCCCGT TGGCTCGGCG GCGTTAGTTG TTACATCGCC TTTGGTCTCG GTGGGCTGTT GAGTTCATTA ACTATCTTAC CTCTGCTGCG TTTTTGGCCG GGCACGCCCG AGGCGCGGAT TATCCGCGTG CAAAAGGCCG TGCACACTAT GTTTAAAGGC TTTGTGGCCA TGTTGACTTG GGCGGGAGTT ATCCGAGTCA GCACCCATAA TGCCGAGCTT TTACACAATG CCAAGGGTGT GATAGTGATT GCCAATCACC CGAGTCTGGT CGATGTGGTT GTATTAATCA GCTTGATGCC TAATGCGGGC TGTATCGTTA AGCAGGGGCT TTGGCGCAAT CCCTTCTTAC GTGGCGTCGT CTCCTGCGCG GGATATATTC CCAATCGCGG CGCCGAACTC ATGCTCGAAG ATTGCCGAGA AGTACTCGCC CGCGGCACGA ATCTGATTAT CTTTCCCGAA GGCACACGCA CCGTATTTGG TGCAAGCATT AACGAATTTG CCCGCGGTGC TGCCAATATT GCTATTCGCA CCCAAGCCGA TATTTTACCT GTGGTTTTGC GCACTAATGT GCGTGGTTTG ACAAAGGAAC AACCTTGGTA TGAGATCCCA AGGCAAACCA TGGGAATGGC CGTCGAAATC GGCAACACAA TTTCTCACCA AGGCTACCAA GCCCCTTTGG GTGAGCATGC GAAAATGGCT CGGCAATTAA CCCGAGACCT TGAACAATAC TATCAACAAC AACTCGAAAA TAATTATGAC TTTACATAA
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Protein sequence | MPNPVPHNAE FNVAYTLPEK RRVGINYIPR WLGGVSCYIA FGLGGLLSSL TILPLLRFWP GTPEARIIRV QKAVHTMFKG FVAMLTWAGV IRVSTHNAEL LHNAKGVIVI ANHPSLVDVV VLISLMPNAG CIVKQGLWRN PFLRGVVSCA GYIPNRGAEL MLEDCREVLA RGTNLIIFPE GTRTVFGASI NEFARGAANI AIRTQADILP VVLRTNVRGL TKEQPWYEIP RQTMGMAVEI GNTISHQGYQ APLGEHAKMA RQLTRDLEQY YQQQLENNYD FT
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