Gene Shewmr7_3675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3675 
Symbol 
ID4254885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4377989 
End bp4378837 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content51% 
IMG OID638124363 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_739712 
Protein GI114049162 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.264662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATC CTGTGCCACA CAATGCCGAA TTTAATGTCG CTTATACGCT GCCCGAAAAG 
CGCCGCGTGG GAATCAACTA TATTCCCCGT TGGCTCGGCG GCGTTAGTTG TTACATCGCC
TTTGGTCTCG GTGGGCTGTT GAGTTCATTA ACTATCTTAC CTCTGCTGCG TTTTTGGCCG
GGCACGCCCG AGGCGCGGAT TATCCGCGTG CAAAAGGCCG TGCACACTAT GTTTAAAGGC
TTTGTGGCCA TGTTGACTTG GGCGGGAGTT ATCCGAGTCA GCACCCATAA TGCCGAGCTT
TTACACAATG CCAAGGGTGT GATAGTGATT GCCAATCACC CGAGTCTGGT CGATGTGGTT
GTATTAATCA GCTTGATGCC TAATGCGGGC TGTATCGTTA AGCAGGGGCT TTGGCGCAAT
CCCTTCTTAC GTGGCGTCGT CTCCTGCGCG GGATATATTC CCAATCGCGG CGCCGAACTC
ATGCTCGAAG ATTGCCGAGA AGTACTCGCC CGCGGCACGA ATCTGATTAT CTTTCCCGAA
GGCACACGCA CCGTATTTGG TGCAAGCATT AACGAATTTG CCCGCGGTGC TGCCAATATT
GCTATTCGCA CCCAAGCCGA TATTTTACCT GTGGTTTTGC GCACTAATGT GCGTGGTTTG
ACAAAGGAAC AACCTTGGTA TGAGATCCCA AGGCAAACCA TGGGAATGGC CGTCGAAATC
GGCAACACAA TTTCTCACCA AGGCTACCAA GCCCCTTTGG GTGAGCATGC GAAAATGGCT
CGGCAATTAA CCCGAGACCT TGAACAATAC TATCAACAAC AACTCGAAAA TAATTATGAC
TTTACATAA
 
Protein sequence
MPNPVPHNAE FNVAYTLPEK RRVGINYIPR WLGGVSCYIA FGLGGLLSSL TILPLLRFWP 
GTPEARIIRV QKAVHTMFKG FVAMLTWAGV IRVSTHNAEL LHNAKGVIVI ANHPSLVDVV
VLISLMPNAG CIVKQGLWRN PFLRGVVSCA GYIPNRGAEL MLEDCREVLA RGTNLIIFPE
GTRTVFGASI NEFARGAANI AIRTQADILP VVLRTNVRGL TKEQPWYEIP RQTMGMAVEI
GNTISHQGYQ APLGEHAKMA RQLTRDLEQY YQQQLENNYD FT