Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3673 |
Symbol | |
ID | 4254883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 4376005 |
End bp | 4376901 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638124361 |
Product | hypothetical protein |
Protein accession | YP_739710 |
Protein GI | 114049160 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000179786 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGTTA ATCAAGATGA TAGAATCACA CCTCAAGAAA CTTCCTCAAG CAGTAATCGC TTTGCTTTGA TTGCGATTGT GCTCGTCGTC CTGCTCTCTG CGGGAGGTTA TTATTACTAC ACTAAAGATG ACTCACCCAA GCTCATCCCC AATGCGCCGA TAGTGCTGCC CGAGCCGCCT TCATCTGAAC CTATGACGCT CGAGACAGGC ACTGAGCCTG AAACCACACC GGTGGAAAAC GAAACTCCAG CGGCAACCAC GCCGGAAACC GAAACCGCAG TCATGCCAAC AGAGCAGACA GAACCAGAAG AAGTCGTCCC TAGCCTGCCT GAGAGCGATG CTTTTGTGCA TCAAAAAGCG CTGGCGATCA TCAATAACAA CGTGGTCGGT TCATCCTTAG TGAACCAAGA TTTGGCCCGT CAGTTTGTGG TGTTCGTAGA TAACTTGGCC CAAGGCGATC TCGCCCGTAA AGTCAGCCCA GTCAAAGGCC CAGAGAAACT GTTCACTGTG TCTGAAATCA CTGATAAAGT GTATTTAAAT CCAGAGAGTT ACCACAGATA CGATGCCTAC GCGACTGTGA TTGCGAACAT GGATGAAGCA AGCTTAATGC ACACCTACAA ACAGCTCACA CCGCTATTTA ATGAGGCCTT TGCCGAACTG GGTTACAGCA ACGCCAAGTT CAATGACAGA GTGCTGCAAG CCATTAAAAT CATGCTCGCC GCCCCTATCA TCGAGGAGCC TATTGAGCTG AGTTCAATCA GCGTGAACTA CCGCTTTGTG GATCCTAATT TAGAGGCCTT GCCGAGCGCG CAAAAACTGC TGATCCGCAT GGGCCCTGAA AACACCCGTA AAGTGAAAGC AGCGCTGCGT AAACTGGAAA ATCAACTCGC ACAGTAA
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Protein sequence | MQVNQDDRIT PQETSSSSNR FALIAIVLVV LLSAGGYYYY TKDDSPKLIP NAPIVLPEPP SSEPMTLETG TEPETTPVEN ETPAATTPET ETAVMPTEQT EPEEVVPSLP ESDAFVHQKA LAIINNNVVG SSLVNQDLAR QFVVFVDNLA QGDLARKVSP VKGPEKLFTV SEITDKVYLN PESYHRYDAY ATVIANMDEA SLMHTYKQLT PLFNEAFAEL GYSNAKFNDR VLQAIKIMLA APIIEEPIEL SSISVNYRFV DPNLEALPSA QKLLIRMGPE NTRKVKAALR KLENQLAQ
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